Gene RPB_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2997 
SymbolanmK 
ID3910796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3411208 
End bp3412347 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID637884903 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_486610 
Protein GI86750114 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0584869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCTTC CTCGGCTGCC GGAAAGGCGC GTTGCCATGA TGATGACGGC GATCGGACTG 
ATGAGCGGGA CGTCGCTCGA CGGGGTCGAC GTCGCCCTGA TCAAGACCGA CGGCCGGCAC
GTGGCGGCGC TCGGCCCCTC CGGCTATCGC CCCTATACCG AGACCGAGCG CGGCCTGCTG
CGCCAGGCTC TGGCGGAGGC GACCGGTCTC GACCGCCGTG ACGCGCGGCC GGGCATCCTC
GCCGAGGCCG AGCGCGCAGT GACGATCGCA CACGCCGAGG CGGTCGCGGC CTTCGTCGCG
CAGAACCGGA TCACCGCCGG CGCCATCGAC ATCGTCGGCT TCCACGGCCA GACCGTGTTG
CACCGGCCCG CGGCCAAATT GACGGTGCAG ATCGGCGACG CCCAGGCACT GGCGAAGGCG
ATCCGGATTC CGGTGATGCA CGATTTTCGC GCGGCCGATG TCGCGGCCGG CGGGCAGGGG
GCGCCGTTCG TCCCGGTCTA TCACCGCGCG CTGGCGCAAT CGCTCGGCCG CGATGGGCCG
ATCGTGGTGG TCAATATCGG CGGCGTCTCC AACGTCACCT ATATCGACGG AAACGATGCG
CTGATCGCCT GCGATACAGG GCCTGGCAAT GCGCTGCTCG ACGATTTCGT GTTCCGCGCG
ATCGGCAAGC CGTTCGATTG TGAGGGCCGG CTCGCGGCCC AGGGCACAGC GGACGAAGGC
TGGATCGCGG ACGCCCTGCA GCATCCGTTC TTCGCCCAGC GGCCGCCGAA ATCGCTCGAC
CGCAACGACT TCGCCTCGCT GGGATTGCGC GATTGGTCGC CGGCCGATGG CGCGGCGACG
TTGACGGCGT TTACCGCGGG CGCGATCGCG GCCATCGTGC CGCTGCTGCC GAAGCCGCCG
ACCAGCTTCG TGATCACGGG CGGCGGTGCG CGCAATCTGA CGATGATGCG GATGCTGCGC
GAGCAACTCG AGCCGGCGCG GGTCGAAAGC GCCGACGCGC TCGGCTGGTC GGCCGATGCG
ATGGAGGCGC AGGCCTTTGG ATTCCTGGCC GCGCGCGGCC TGAAAGGCCT GCCGCTCAGC
TATCCGGCGA CCACCGGGGT GTCGTTCCCG ATGACCGGCG GGCTGCTGGC GCGACCGTAG
 
Protein sequence
MDLPRLPERR VAMMMTAIGL MSGTSLDGVD VALIKTDGRH VAALGPSGYR PYTETERGLL 
RQALAEATGL DRRDARPGIL AEAERAVTIA HAEAVAAFVA QNRITAGAID IVGFHGQTVL
HRPAAKLTVQ IGDAQALAKA IRIPVMHDFR AADVAAGGQG APFVPVYHRA LAQSLGRDGP
IVVVNIGGVS NVTYIDGNDA LIACDTGPGN ALLDDFVFRA IGKPFDCEGR LAAQGTADEG
WIADALQHPF FAQRPPKSLD RNDFASLGLR DWSPADGAAT LTAFTAGAIA AIVPLLPKPP
TSFVITGGGA RNLTMMRMLR EQLEPARVES ADALGWSADA MEAQAFGFLA ARGLKGLPLS
YPATTGVSFP MTGGLLARP