Gene RPB_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2992 
Symbol 
ID3910791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3406281 
End bp3407039 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID637884898 
ProductFeS assembly ATPase SufC 
Protein accessionYP_486605 
Protein GI86750109 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0584869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT TGCTCGAAGT CAAGAATCTC CAGGTCCGCG TCGCCGAGCG CGAGATCCTG 
CATGGGCTGA CGCTCAGCGT GAATCCGGGT GAGGTGCACG CGATCATGGG GCCGAACGGC
TCCGGCAAGT CGACGCTGTC GCATGTGATC GCCGGCAAGC CGGGCTACGA AGTCACCGGC
GGCGAGATCC TGTTCAAGGG CGAGGATCTG CTGGCGATGG CGCCGGACGA GCGCGCCGCC
AAGGGCGTGT TCCTGGCATT TCAGTATCCG GTCGAAATTC CCGGCGTGGC GACGATGACG
TTCCTGCGCA CCGCGCTGAA CGCGCAGCGC AAGTCGCGCG GCGAAGCCGA ACTGTCGACG
CCGGATTTCC TCAAGCGCGT GCGTGAAGTG GCGGGTTCGC TCGGCATTCC GCAGGAGATG
CTGAAGCGCG GCGTCAATGT CGGCTTCTCC GGCGGCGAGA AGAAGCGCAA CGAAGTGCTG
CAGATGGCGC TGTTTCAGCC GAGCCTGTGC ATCCTCGACG AGATGGATTC CGGCCTCGAC
ATCGACGCGC TGCGCATCGC CTCCGAAGGC GTCAACGCGC TGCGCACGCC GGACCGGGCG
ATGGTGGTGA TCACGCATTA TCAGCGGCTG CTCGACTACA TCGTGCCGGA CTTCGTGCAT
GTGATGTCGC GCGGCAAGGT GGTGAAGAGC GGCGGCAAGG AGCTGGCGCT CGAACTCGAA
GCCAATGGCT ACGCGCAATA TCAGGACGCG GCGGCCTGA
 
Protein sequence
MSALLEVKNL QVRVAEREIL HGLTLSVNPG EVHAIMGPNG SGKSTLSHVI AGKPGYEVTG 
GEILFKGEDL LAMAPDERAA KGVFLAFQYP VEIPGVATMT FLRTALNAQR KSRGEAELST
PDFLKRVREV AGSLGIPQEM LKRGVNVGFS GGEKKRNEVL QMALFQPSLC ILDEMDSGLD
IDALRIASEG VNALRTPDRA MVVITHYQRL LDYIVPDFVH VMSRGKVVKS GGKELALELE
ANGYAQYQDA AA