| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2985 |
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| Symbol | |
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| ID | 3910784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3399339 |
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| End bp | 3400889 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884891 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_486598 |
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| Protein GI | 86750102 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0305282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCA ACAATCTCGG CCTTTCAGAC AAGGTCCTCG CCGCTGTCGC AGCCAGCGGC
TACACGACGC CCACCCCGAT CCAGGAACAG GCGATCCCCC ACGTGCTCGC CCGGCGAGAC
GTCCTCGGCA TCGCCCAGAC CGGCACCGGC AAGACCGCGG CGTTCGTGCT GCCGATGCTG
ACGATGCTGG AAAAGGGCCG CGCCCGCGCG CGGATGCCGC GCACCCTGAT CCTCGAGCCG
ACCCGCGAGC TCGCCGCCCA GGTCAAGGAA CAGTTCGACA AATACGGCGC CGGCCAGAAG
CTCAACGTCG CTTTGCTGAT CGGCGGCGTC TCGTTCGGTG ATCAGGACCT CAAACTCACC
CGCGGCGTCG ACGTGCTGAT CGCCACCCCG GGCCGCCTGC TCGACCACAC CGAACGCGGC
GGCCTGCTGC TCACCGGCGT CGAGATGCTG ATCATCGACG AAGCCGACCG GATGCTCGAC
ATGGGCTTCA TTCCGGACAT CGAGCGGGTC TGCAAGCTGG TGCCGTTCAC CCGCCAGACG
CTGTTCTTCA CCGCGACGAT GCCGCCGGAA ATCCGCCGCG TCACCGAGAC CTTCCTGCAC
AATCCCGAGA AGATCGAAGT CTCCAAGCCG GCTTCCACCG CCGTGACGGT GGCGCAGTCG
CAGGTGGCCT GCGGTCGCGA GCCGCACGAG AAGCGCGAGA CCTTGCGCAG CCTGATCCGC
GCCGCCACCG ACCTGCAGAA CGCGATCATC TTCTGCAACC GCAAGCGCGA AGTGGCGTTG
CTGGCGAAAT CGCTGCAGAA GCACGGCTTC AGCGTCGGCG CGCTACACGG CGACATGGAC
CAGAGCGCCC GCACCGCGGC GCTGGATCAA TTCCGCAAGG GCGAATTGCC GATCCTGGTG
GCCTCGGACG TCGCCGCGCG CGGCCTCGAC ATTCCGGAAG TCAGCCACGT CTTCAATTTC
GACGTGCCGC ATCATCCCGA CGACTACGTC CATCGCGTCG GCCGCACCGG CCGCGCCGGA
CGGCTCGGCA CCGCGATCTC GATCGTCGCG CCGTCCGACC AGAAATCGAT CGCCGCGATC
GAGAAGCTGA TCGGCAAGGA AATCCCCCGC GTCGACGCCG GCCCGGTCGG CGAAGCCGAC
CGCGAGCAGG CCGAAGACAC CGACCGGCCC GCGCGGTCGT CGCGGCGCTC GTCCGAATCG
CGCAGCCGCG AAGTGCGGGG CGAAGACCGC CCGGCCCGCG AGTCGCGTGG CCCGCGGCGC
GAACCGCGCG GCGAGGGACG TGGCGAAGCG CGCCCTGCGC GTGAGCCGCG GGAGGCCCGC
GCACCGGTCG AGGCCCGTGA GGCGCCCCGT GAGGTTCGCG AGCCGCGTGA ACCGCGCGAG
GCCCGCAAGC CGCGCCGCGA ACCGCGCAAC GCGCCGGCGG CGCCCGCCGC CGCGCCGGCT
GCCCATGCCT CGTTCGGGTC GGCGCCGCCG GCACGCGACC TGTCGTCCGA GCCGGGCGAC
CATTCGCATC TGCCCGCCTT CCTGCTGCGT CCTGTGCGCG CACGGGGCTG A
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| Protein sequence | MSFNNLGLSD KVLAAVAASG YTTPTPIQEQ AIPHVLARRD VLGIAQTGTG KTAAFVLPML
TMLEKGRARA RMPRTLILEP TRELAAQVKE QFDKYGAGQK LNVALLIGGV SFGDQDLKLT
RGVDVLIATP GRLLDHTERG GLLLTGVEML IIDEADRMLD MGFIPDIERV CKLVPFTRQT
LFFTATMPPE IRRVTETFLH NPEKIEVSKP ASTAVTVAQS QVACGREPHE KRETLRSLIR
AATDLQNAII FCNRKREVAL LAKSLQKHGF SVGALHGDMD QSARTAALDQ FRKGELPILV
ASDVAARGLD IPEVSHVFNF DVPHHPDDYV HRVGRTGRAG RLGTAISIVA PSDQKSIAAI
EKLIGKEIPR VDAGPVGEAD REQAEDTDRP ARSSRRSSES RSREVRGEDR PARESRGPRR
EPRGEGRGEA RPAREPREAR APVEAREAPR EVREPREPRE ARKPRREPRN APAAPAAAPA
AHASFGSAPP ARDLSSEPGD HSHLPAFLLR PVRARG
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