| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2978 |
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| Symbol | |
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| ID | 3910777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3389820 |
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| End bp | 3391874 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884884 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_486591 |
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| Protein GI | 86750095 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.141952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG CATTGAAGGC GAGCAGCAAA TCGAAACCGG CCTCCGACCT GTTCGGAGCC
GCGGCGAAAT CCGGTGCGCC GCGCGCGGCC GCCAAGCCGA CCGGCGGCGC CGAGGCCGGT
TACACCGCCG CCGACATCGA GGTGCTCGAA GGGCTGGAGC CGGTGCGGCG CCGCCCCGGC
ATGTATATCG GCGGCACCGA CGAGAAGGCG CTGCATCACC TGTTCGCCGA AGTGATCGAC
AACTCGATGG ACGAGGCGCT GGCCGGCCAC GCCACCTTCA TCGAGGTCGA GCTCGGCGCC
GACGGCTACC TCACCGTCTC CGACAACGGC CGCGGCATCC CCGTTGATCC GCATCCGAAA
TTTCCGAAAA AGTCGGCGCT CGAAGTGATC ATGTGCACGC TGCATGCCGG CGGCAAATTC
GACAGCAAGG TGTACGAGAC CTCGGGCGGT CTGCACGGCG TCGGCGTCAG CGTCGTCAAT
GCGTTGTCGT CGCTGCTTGA AGTGGAAGTC GCGCGCGGCC AGCAACTCTA CCGCATGGTG
TTCGCGCGCG GCATCCCGCA GGGCAAGCTG GAGAGCCTGG GCAAGATCAA CAACCGCCGC
GGCACCCGCG TCCGCTTCAA GCCCGACACC GACATCTTCG GCGCCAAAGC GGCGTTCAAG
CCGCAGCGGC TGTTCAAGAT GGCGCGGTCG AAGGCGTATC TGTTCGGCGG CGTCGAGATC
CGCTGGAAGT GCGACCCCGA ATTGCTGAAG GGTGTCGAGG ATGTTCCGCC CGAGGACACC
TTCCACTTCC CCGGCGGCCT GAAGGACTAT CTCGGCGCGG CGATCCACGC CGACACGCTG
GTGCATCCCG ACATTTTCTC CGGCAAGTCC GGCCGCAACG GCGCCCACGG CGCCTGCGAA
TGGGCCGTCG CCTGGACCGC GGACGCCGAC GGCTTCCTGT CGTCCTACTG CAACACGGTG
CCGACGCCCG ACGGCGGCAC CCATGAATCC GGCATGCGCT CCGCTTTGCT GCGCGGCCTC
AAGGATCACG CCGAGCGCGT CGGCCAGGGC AAGCGCGCCT CGTCGATCAC CTCCGAAGAC
GTCATGGTCG GCGCCGCGGT GATGCTCAGC GTGTTCGTGC GCGAGCCGGA ATTCCAGGGC
CAGACCAAGG ACCGCCTCGC CACCGCCGAA GCGCAGAAGA TCGTCGAACA GGCGATCAAG
GACCCGTTCG ACCATTGGCT GTCCGGCAAC CCGGTGCAGG CCAACAAGCT CCTGGACTTC
GTCGTCGAGC GCGCCGAGGA GCGGCTGCGC CGCCGCCAGG AAAAGGAAAT CTCGCGCAAG
ACCGCGGTGA AGAAGCTGCG GCTGCCCGGC AAGCTCGCCG ACTGCACCAA CACCGCCGCC
GAAGGCTCCG AACTGTTCAT CGTCGAGGGC GATTCGGCCG GCGGCAGCGC CAAGCAGGCG
CGCGACCGCA AGACGCAAGC TGTGCTCCCC TTGCGCGGCA AAATCCTCAA CGTCGCCTCG
GCGACCAAGG ACAAGGTGGT GGCGAACGCC CAGCTCTCCG ACCTGATGCA GGCGATCGGC
TGCGGCACCG GCGTGAACTA CCGCGAGGAA GATCTGCGCT ACGCGCGCAT CATCATCATG
ACCGACGCCG ACGTCGACGG CGCGCATATC GCCTCGCTGC TGATCACCTT CTTCTATCGG
CAGATGCCGA AGCTGATCGA CGAAGGCCAC CTCTATCTCG CGGTGCCGCC GCTGTACCGC
CTGACCCATG GCGCCAAGAC CGTCTACGCC CGCGACGACG CCCACAAGGA CGAGCTGCTG
AAGAAGGAAT TCAACGCCAA CGCCAAGGTC GATGTCGGCC GCTTCAAAGG CCTCGGCGAG
ATGATGCCCG CCCAGCTCAA GGAAACCACC ATGGACCCGG CGCGCCGCAC GTTGCTGCGC
GTCAGCCTGC TGGACATCGA CCGCGACGGC ACCGCCGATT CCGTCGAGCG CCTGATGGGC
ACCAAGGCCG AAGCAAGGTT CGCCTTCATC AGCGACAAGG CGGAATTCGC GAGCGAGGAT
CTGCTGGACG TGTGA
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| Protein sequence | MAKALKASSK SKPASDLFGA AAKSGAPRAA AKPTGGAEAG YTAADIEVLE GLEPVRRRPG
MYIGGTDEKA LHHLFAEVID NSMDEALAGH ATFIEVELGA DGYLTVSDNG RGIPVDPHPK
FPKKSALEVI MCTLHAGGKF DSKVYETSGG LHGVGVSVVN ALSSLLEVEV ARGQQLYRMV
FARGIPQGKL ESLGKINNRR GTRVRFKPDT DIFGAKAAFK PQRLFKMARS KAYLFGGVEI
RWKCDPELLK GVEDVPPEDT FHFPGGLKDY LGAAIHADTL VHPDIFSGKS GRNGAHGACE
WAVAWTADAD GFLSSYCNTV PTPDGGTHES GMRSALLRGL KDHAERVGQG KRASSITSED
VMVGAAVMLS VFVREPEFQG QTKDRLATAE AQKIVEQAIK DPFDHWLSGN PVQANKLLDF
VVERAEERLR RRQEKEISRK TAVKKLRLPG KLADCTNTAA EGSELFIVEG DSAGGSAKQA
RDRKTQAVLP LRGKILNVAS ATKDKVVANA QLSDLMQAIG CGTGVNYREE DLRYARIIIM
TDADVDGAHI ASLLITFFYR QMPKLIDEGH LYLAVPPLYR LTHGAKTVYA RDDAHKDELL
KKEFNANAKV DVGRFKGLGE MMPAQLKETT MDPARRTLLR VSLLDIDRDG TADSVERLMG
TKAEARFAFI SDKAEFASED LLDV
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