Gene RPB_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2972 
Symbol 
ID3910771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3383721 
End bp3384716 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content69% 
IMG OID637884878 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_486585 
Protein GI86750089 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01851] N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.87184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.551009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CGGACACTCC AACGAACGAT GCCGCCTCCG GCCGGAGCGG CAAGCCGGTC 
GTGTTCATCG ACGGCGCCGC CGGCACCACC GGGCTCGGCA TCCGCGAGCG GCTGGCCCGC
CACGGTCAGG TCATCGTCAA GGATATCGCC GACGACAAGC GCAAGGACAC GGCCGCCAAG
CGCGCGCTGA TGGCCGAGGT CGATCTCGTG ATCCTGTGCC TGCCGGACGA TGCGGCGAAA
GAGACCGTGG CGACGATCGA CGGCATGGGC GGCGACGCGC CGAAAGTGCT CGACGCCTCG
ACCGCGTTTC GCGTCGCGCC GGACTGGGCC TATGGCTTCG CCGAGCTGGC GCCGGACCAG
CCCGAGAAGA TCCGCGCCGC GCGAAAAGTC TCCAATCCGG GCTGCTACCC GACCGGCGGG
GTCGCGCTGC TGCGGCCGCT GGTCGACGCC GGCCTGATCC CGCCGGACCA CCCGGTGTCG
ATCAACGCGG TCAGCGGTTA TTCCGGCGGC GGCAAGGCGA TGATCGCGGC CTACGAGGCC
GGCACCGCGC CGGCGTTCGA GCTCTACGGG CTCGGCTTCG CGCACAAGCA TCTGGCCGAG
ACGCAGCTTT ATGCGAAGCT GACGCGGCGG CCGATCTTCA TCCCGTCGGT CGGCAATTTC
CGGCAGGGCA TGCTGGTGTC GGTGCCGCTG CATCTTGACA CATTGCCGGG CAAGCCCGCG
GTGGCGGACC TGCAGGCTGC TCTGGAGGCG CGCTATGCCG GCTGCGCCTA TGTGTCGGTG
CTGCCGCAGG ACAGCGCGGC GATCAGCGAC GGCCGGATCG AGCCGGAGGC GCTGAACGAG
ACCAACCGGC TGGAACTCTG CGTGTTCGGC AGCGATGCGC ATCGTCAGGC GGTGCTGGTG
GCGCGGCTCG ACAATCTCGG CAAGGGCGCC TCGGGCGCCG CGGTGCAGAA CATGCGGCTG
ATGCTGGGGT TGCCGGAAAC GCCGGGTCTG GATTAG
 
Protein sequence
MTLTDTPTND AASGRSGKPV VFIDGAAGTT GLGIRERLAR HGQVIVKDIA DDKRKDTAAK 
RALMAEVDLV ILCLPDDAAK ETVATIDGMG GDAPKVLDAS TAFRVAPDWA YGFAELAPDQ
PEKIRAARKV SNPGCYPTGG VALLRPLVDA GLIPPDHPVS INAVSGYSGG GKAMIAAYEA
GTAPAFELYG LGFAHKHLAE TQLYAKLTRR PIFIPSVGNF RQGMLVSVPL HLDTLPGKPA
VADLQAALEA RYAGCAYVSV LPQDSAAISD GRIEPEALNE TNRLELCVFG SDAHRQAVLV
ARLDNLGKGA SGAAVQNMRL MLGLPETPGL D