| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2969 |
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| Symbol | |
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| ID | 3910768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3380804 |
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| End bp | 3382609 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637884875 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_486582 |
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| Protein GI | 86750086 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.200388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA TGCTACCAGA AACCAGCACG GCGAAGAAGT TCGATCCCGA GGCTTTCGCG
CGTAATCTGG CGCAGGCGAT GGAGTGCGGC AGCCAGGCGC TGGCGACGAT GCTGAAGCCG
AGCGAGCCGA TCGACGGTGT CAAGCCGCCG ACCGAACTGA CGGAGATCGT CAAGACGCTC
ACCAGCGTCG CCACCTACTG GATGTCCGAC CAGACCCGCG CCGCGGAGCT GCAGACGAAG
CTCGGCAAAT CCTATCTCGA GCTGTGGGGC AACGCCTCCA AGAAGCTCGC CGGCGAGACG
GCCGTCGCCC CGACCATCGA GCCGCCGGCG CGCGACAAGC GTTTCGCCGA TCCGGACTGG
CGAAAGAACC AGTTCTACGA ATTCATCATG CAGGCCTATC TGTTGACCTC GCAATGGGCC
AACGAGCTGG TCGAGAAGGC CGACGGCCTC GACCCGCACA CCAAGCGAAA GGCCGCATTC
TACATCCAGC AGATCACCAA CGCGATGGCG CCGTCGAACT TCGTGCCGAC CAATCCGGAA
TTGACCCGGC TGACGCTCGA GAACAGCGGC GACAATCTGG TGCGCGGCAT GAAGATGCTC
GCCGAGGACA TCGCCGCCGG CAAAGGCCAT CTCAAGATTC GCCAGTCCGA CCCGTCCAAT
CTGGAAGTCG GCGTCAACAT GGCGACGACG CCCGGCAAGG TGATCTTCCA GAACGAGATC
ATGCAACTGA TCCAGTACAC GCCCGCGACC GAGACGGTGC TGCGCACGCC TCTGCTGATC
GTGCCGCCAT GGATCAACAA GTTCTACATT CTCGATCTCA AGCCCGAGAA GTCGTTCATC
AAATACTGCG TCGACCAGGG TCTCACCGTG TTCGTGATCT CCTGGGTCAA TCCCGACAAG
CGCCTCGCCG ACAAGAGCTT CGCCGACTAC ATGAAGCTCG GGCCGCTGAC CGCGATGGAC
GTGATCGAGA AGGTCACCGG CGAGCTGAAG GTGCACACCA TCGGCTATTG CGTCGGCGGC
ACCCTGCTCG CCTCGACGCT GGCCTGGCTG GCCGAGCGCC GCCGCCAGCG CGTCACCTCG
GCGACCTTCC TGACCACCCA GGTCGATTTC ACCCATGCCG GCGACCTCAG CGTGTTCGTC
GACGAGGGCC AGATCTCGGC GCTGGAGCGC GACATGCAGA CGACCGGCGT GCTCGAAGGC
GCCAGGATGG CGATGGCGTT CAACATGCTG CGGTCGAACG ACCTGATCTG GTCCTATGTG
GTCAGCAACT ATCTGAAGGG CCAGCCGCCC GCCGCGTTCG ACCTGCTGCA CTGGAATTCC
GACGCCACCC GGATGCCGGC GGCGAACCAC TCTTACTATC TGCGCAACTG TTATCTCGAC
AACAAGCTGT CGGCCGGCAC CATGGTGCTC GACGACACCC CGCTCGATCT GTCGAAGGTC
AAGGTGCCGA TCTACAACCT CGCCACCCGC GAGGACCACA TCGCGCCGGC GGAATCCGTG
CTGTACGGTT CGCAATTCTT CGGCGGCCCG GTGAAATACG TGCTGTCCGG CTCCGGCCAC
ATCGCCGGCG TGATCAATCC GCCGGCGGCG AACAAATATC AGTACTGGAC CAGCGAGACC
ATCCGCGCCG GCTCGGTCGC CGAATGGCTG AAGGGCGCGC AGGAGCACAA GGGTTCGTGG
TGGCCGGACT GGCGCGAATG GGTCGGCAGT TTCGATCCCG AACAGGTCCC TGCCCGCGGC
ATCGGCAACG AGACCTATCA GCCGATCGAG GACGCCCCCG GCAGCTACGT CCGGGTGCGA
TCCTGA
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| Protein sequence | MSDMLPETST AKKFDPEAFA RNLAQAMECG SQALATMLKP SEPIDGVKPP TELTEIVKTL
TSVATYWMSD QTRAAELQTK LGKSYLELWG NASKKLAGET AVAPTIEPPA RDKRFADPDW
RKNQFYEFIM QAYLLTSQWA NELVEKADGL DPHTKRKAAF YIQQITNAMA PSNFVPTNPE
LTRLTLENSG DNLVRGMKML AEDIAAGKGH LKIRQSDPSN LEVGVNMATT PGKVIFQNEI
MQLIQYTPAT ETVLRTPLLI VPPWINKFYI LDLKPEKSFI KYCVDQGLTV FVISWVNPDK
RLADKSFADY MKLGPLTAMD VIEKVTGELK VHTIGYCVGG TLLASTLAWL AERRRQRVTS
ATFLTTQVDF THAGDLSVFV DEGQISALER DMQTTGVLEG ARMAMAFNML RSNDLIWSYV
VSNYLKGQPP AAFDLLHWNS DATRMPAANH SYYLRNCYLD NKLSAGTMVL DDTPLDLSKV
KVPIYNLATR EDHIAPAESV LYGSQFFGGP VKYVLSGSGH IAGVINPPAA NKYQYWTSET
IRAGSVAEWL KGAQEHKGSW WPDWREWVGS FDPEQVPARG IGNETYQPIE DAPGSYVRVR
S
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