Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2967 |
Symbol | |
ID | 3910766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3378739 |
End bp | 3379959 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884873 |
Product | aminotransferase |
Protein accession | YP_486580 |
Protein GI | 86750084 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAT TTTACCGCAT CCGCCGCCTG CCGCCTTACG TGTTCGAACA GGTCAACCGG GCCAAGGCGG CCGCGCGGAA TGCCGGGGCC GACATCATCG ACATGGGGAT GGGCAACCCG GACCTGCCGG CGCCGCCGCA CGTGCTGGAG AAGCTCAAGG AGACGCTCGG CAAGCCGCGC ACCGACCGCT ATTCCGCCTC GCGCGGCATC ACCGGGCTGC GCAAGGCCCA GGCGGCCTAT TACGACCGCC GGTTCGGGGT GAAGCTGAAT CCCGACACCC AGGTGGTCGC CACGCTCGGC TCCAAGGAAG GCTTCGCCAA CGTCGCCCAG GCGATCACCG CGCCAGGCGA CGTCGTGCTG TGCCCGAATC CGAGCTACCC GATCCACGCC TTCGGCTTCC TGATGGCCGG CGGCGTGATC CGCTCGGTGC CGTCCGAGCC GACCCCGGAA TTCTTCGCCG CGGCCGAGCG CGCCATCATC CATTCGATCC CGAAGCCGAT CGCGCTGATC GCCTGCTATC CGTCGAATCC GACCGCCTAT GTGGCCAGCC TCGATTTCTA CAAGGATCTG GTGGCGTTCG CGAAGAAGCA CGAGATCATG ATCCTGTCGG ATCTGGCCTA TGCCGAAGTC TATTTCGACG ATGCCAACCC GCCGCCGTCG GTGCTGCAGG TGCCGGGCGC GATGGACGTC ACCGTCGAGT TCACCTCGAT GTCGAAGACG TTCTCGATGG CCGGCTGGCG GATGGGCTTT GCGGTCGGCA ACGAGCGCAT CATCGCCGCC CTGGCGCGGG TGAAGTCGTA TCTCGATTAC GGTGCGTTCA CGCCGGTGCA GGTCGCCGCC ACCGCGGCGC TGAACGGCCC GGACGATTGT ATCCGCGAGA TGCGCGAGAC CTACAAGAAG CGCCGCGACG CGCTGGTCGA GAGCTTCGGC CGGGCCGGCT GGGAGATCCC GCCGCCGTCG GCCTCGATGT TCGCCTGGGC GCCGCTGCCG CCGGCATTTC GCGAGATCGG CAGCATGCAG TTCGCCACCC TGATGGTGGA GAAATCCGGC GTCGTGGTGT CGCCCGGCGT CGCCTTCGGC GAGCACGGCG AAGGCTATGT TCGCATCGCC ATGGTGGAAA ACGAGCAGCG CATCCGCCAG GCGGCGCGCG GCGTCCGGCG CTTCCTTGAA AGCGGCGTCG AAACGTTGCA CAACGTGGTG CCTCTCGCCA CCCGGCGATA G
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Protein sequence | MEEFYRIRRL PPYVFEQVNR AKAAARNAGA DIIDMGMGNP DLPAPPHVLE KLKETLGKPR TDRYSASRGI TGLRKAQAAY YDRRFGVKLN PDTQVVATLG SKEGFANVAQ AITAPGDVVL CPNPSYPIHA FGFLMAGGVI RSVPSEPTPE FFAAAERAII HSIPKPIALI ACYPSNPTAY VASLDFYKDL VAFAKKHEIM ILSDLAYAEV YFDDANPPPS VLQVPGAMDV TVEFTSMSKT FSMAGWRMGF AVGNERIIAA LARVKSYLDY GAFTPVQVAA TAALNGPDDC IREMRETYKK RRDALVESFG RAGWEIPPPS ASMFAWAPLP PAFREIGSMQ FATLMVEKSG VVVSPGVAFG EHGEGYVRIA MVENEQRIRQ AARGVRRFLE SGVETLHNVV PLATRR
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