Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2952 |
Symbol | |
ID | 3910751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3362188 |
End bp | 3362766 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637884858 |
Product | hypothetical protein |
Protein accession | YP_486565 |
Protein GI | 86750069 |
COG category | [S] Function unknown |
COG ID | [COG3247] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0711734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCT CAGACGGACC CGAGCGGCTT CAGGCCACGG TCGAGGCGGC GATCGGCAAG CACTGGAAGG CCTATCTGGT CGAAGGCATC CTGCTTCTGG TCTTCGGCTT CGCCGCGATC CTGCTGCCGC TGCTCGCCAG CCTCGCGATC ACGATCCTGC TCGGCTGGCT TTTCCTGGTC AGCGGCATCG CCGGCCTCGC CTTCAGCTTC TGGGCGCGGC AGGCGCCGGG GTTCTGGTGG TCGCTGGCCT CCGCAATCCT GGCGGTGATC GCCGGCATCG TCGTGATCTC GATGCCGGTG GAGATCACGG TGACGCTCAC CTTGGTGATC GGCATCTACT TCCTGGCCGA AGGCGTGGCG ACGATCATGT ACGCGCTCCA GCACCGCGGC CGGCTGTCGG AACGCTGGGG CTGGATGCTC GCCGCCGGCG TGCTCGACAT CCTGGTGGCG TTCATCATCA TCTCGGGATG GCCCGGCACC GCGGCCTGGG CGGTCGGCCT TCTGGTCGGC ATCAATCTGG TGTTCGGCGG CACCTCGCTG ATCGCGATGG CGCTCGCCGC CCGCAACAAG GCGTCATGA
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Protein sequence | MTLSDGPERL QATVEAAIGK HWKAYLVEGI LLLVFGFAAI LLPLLASLAI TILLGWLFLV SGIAGLAFSF WARQAPGFWW SLASAILAVI AGIVVISMPV EITVTLTLVI GIYFLAEGVA TIMYALQHRG RLSERWGWML AAGVLDILVA FIIISGWPGT AAWAVGLLVG INLVFGGTSL IAMALAARNK AS
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