Gene RPB_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2937 
Symbol 
ID3910735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3350043 
End bp3350522 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID637884842 
Producthypothetical protein 
Protein accessionYP_486550 
Protein GI86750054 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.640923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.332215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCT TTCGTTTTGG ACGTTTCGGC CGCCTGCTGG GCGCGCTGGC TGCTGCGTTG 
CTGTTGTGCG CGTTCGCCGC GCAGACCGCG CAGGCGGCCA AGATGGAGAC GCTGGAGATC
GTCACCCGGA CCGGCGTGCA TGTGTTCAGC GTCGAGATCG CCACCACCGA GCAGGAGCGC
GAGACCGGCC TGATGTATCG CAAGCAATTG CCCGAAGGGC AGGGCATGCT GTTCGACTTC
CGGCCGGAGC AGCCGGTGTC GATGTGGATG AAGAACACCT ACATCCCGCT CGACATGATC
TTCATCAGCG CCGACGGCCG CATCCTGCGG ATCGCCGAGA ACACCGAACC GCTGTCGACG
AAGATCATCG CCTCCGGCGG GCCGGTGACC GGCGTGCTCG AAGTCGTCGG CGGCACCGCG
AAGAAGCTCG GCATCGCAGC CGGCGACCGG GTCGGGCATC CGCTGTTCAA GGGCCGCTGA
 
Protein sequence
MTSFRFGRFG RLLGALAAAL LLCAFAAQTA QAAKMETLEI VTRTGVHVFS VEIATTEQER 
ETGLMYRKQL PEGQGMLFDF RPEQPVSMWM KNTYIPLDMI FISADGRILR IAENTEPLST
KIIASGGPVT GVLEVVGGTA KKLGIAAGDR VGHPLFKGR