Gene RPB_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2927 
Symbol 
ID3910724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3340302 
End bp3341105 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID637884831 
Producthypothetical protein 
Protein accessionYP_486540 
Protein GI86750044 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.483755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC ATTCGGATAC CGCTGACGGA GATCGTCTGC ATCACCACGC GCTCGACCGC 
ATCGCGCATG CGACGTTGCG CGCCGGCGCC ATCCTGGCGC AGAGCGGCGC CTCCGTCCGC
GTCGTGCATG AAGGCGCGCG GATGATCGCC GGCGGGCTCG GCGTTGAGGT GCTGGGGATA
CGATCCGGCT ATGCCTCGTT CGAGATCACG CTGGAACGCG ACCGCCATAC CATCACCCGC
ATGACGCAGA TCGGCCCCCA CGGCGTCAAT CACCGGCTCG ACTTCGCGGT GCGCGATCTG
GTGCTGCGCG TCTCGCGCGG GGGAATGTCC CCGGAGGAGA TCGAAAGCGA GCTCGACCGG
CTGCTGCGCG ACACCCCACG GCATCCGCCG TGGCTGGTGG CGATCGCCAC CGGCGCCGCC
TGCGCGGCGT TCGGCCGGCT GCTCGGCGCC GACTGGCTGT CGTTCGGGCC GATGCTGGCG
GCGGCAGGGA TCGGCCAGCG GCTCCGGCAT GCGCTGCTCG GGCGCCATGT CAACGTGTTC
GTGGTCGCCG CGATCATCGG TTGCGTCGCC GCGACCCTCG GCGGCCTCGG CGCGCGTCTG
GCCGGCAGCA GCACGGTCGA GCTGGCGATG ATGGCCTCGA TCCTGCTGCT GGTGCCGGGC
GTGCCATCGA CCAACGCGCA GACCGACGTG CTCGACGGCT ACCCGACGAT GGGCAGCGCC
CGCGCGGTCT GGGTGGTGAT GATCATGGTG TTTGCGGTCA CCGGGCTGTG GATCGCCGAA
TTCGTATTGA GGGTGCCGGT GTGA
 
Protein sequence
METHSDTADG DRLHHHALDR IAHATLRAGA ILAQSGASVR VVHEGARMIA GGLGVEVLGI 
RSGYASFEIT LERDRHTITR MTQIGPHGVN HRLDFAVRDL VLRVSRGGMS PEEIESELDR
LLRDTPRHPP WLVAIATGAA CAAFGRLLGA DWLSFGPMLA AAGIGQRLRH ALLGRHVNVF
VVAAIIGCVA ATLGGLGARL AGSSTVELAM MASILLLVPG VPSTNAQTDV LDGYPTMGSA
RAVWVVMIMV FAVTGLWIAE FVLRVPV