| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2918 |
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| Symbol | |
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| ID | 3910714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3326640 |
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| End bp | 3328835 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637884821 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_486531 |
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| Protein GI | 86750035 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGG ACCGCCTCAC ACGCTTGCTC TCGTCATTGC GAGGAGCGGA GCGACGAAGC
AATCCAGAGG TGGCAACCGT GGCCCCTGGA TTGCTTCGCT CCGCTCGCAA TGACGGGTGG
AAAGGGTGGT GGTGGATCAA GACGACAGCA ATCGTTTCGG CCGTCCTCGT CATCGCTGCG
ATCGGCGCCA TCGCGGCCTA CGTCGCCTCG CTCGGGCCGC TGCCGCTCGA CGAGGCGCGC
CGGACCTCGG TCAGCGTGGT GGATCGCCAG GGCAAGCTGC TGCGCGCTTA TGCGATGGCC
GACGGCCGCT GGCGGCTGCC GGTCGATGCG CAGACGCAGG TCGATCCGCG CTATCTCACG
CAACTGATCG CCTATGAGGA CAAGCGGTTC TGGTCGCATC GCGGCGTCGA TCCCTGGGCG
ATCGGCCGCG CCGCGCTGCA GCTCGCGACC CATGGCCAGA TCGTGTCCGG CGGATCGACC
ATCACCATGC AGCTCGCCCG GCTGATGGAG CCACGGCGGG AACGCTCGCT CTCGGCCAAG
CTGCGCCAGA TGGTCCGCGC CATCGAGCTC GAACGCACAC TGAGCAAGCC GCAGATCCTC
GATCTGTATC TGGCGCTGGC GCCGTATGGC GGCAATCTCG AAGGCATCCG CGCCGCCTCG
ATCGCGTATT TCGGCAAGGA GCCCAAGCGG CTGACATTGG CCGAATCCGC GTTGCTGGTG
GCGATTCCGC AATCGCCCGA GCGGCGGCGG CTCGACCGCC ATCCGGCGAC GGCGCAGGCG
GCGCGCGATC GCGTGCTGAC GCGGCTGGTC GAGGATCAGG TGGTCAGCAC CGAGGACGCC
GCGCAGGCGA GGGCGGTGCC GGTCGCGCGC GCGCGCAAGC CGATGCCGGT GCTGGCGCCG
CATTCGGCCG ATCAGGCGAC CGCCGTGATC AAAGACAAGC CGGTGATCCG GTTGACGCTC
GACGCCGGCA TTCAGCACGC GCTGGAAGCG CTGGCGCGCG ACCGTGCTGT GGCGCTCGGC
CCCGACATCT CGATCGGCAT CGTCGCGGTG GATAACGAAA CCGGCGACGT GCTGGCCCAT
GTCGGCTCGG CCGACTATTT CGACGACCGC CGTGCCGGCC AGGTCGACAT GACCCGCGCG
GTGCGCTCGC CCGGCTCGAC ACTGAAGCCA TTCATCTACG GGCTCGCCTT CGAGGACGGT
TTCGTCCATC CGGAGAGCTT GATCGACGAC CGGCCGGTCC GCTACGGCGC CTATGCGCCG
GAGAATTTCG ACATGACGTT CCAGGGCACG GTGCCGGTGC GCAAGGCGCT GCAATTGTCG
CTCAACGTCC CGGCGATCGA GCTGCTCGAC CGGGTCGGTC CGCACCGGCT GGCGTCGCGG
CTGAAGCAGG CCGGCGTCGG CCTGGTGCTG CCGAAGGACG AAGCGCCCGG GCTGGCGATG
GGGCTCGGCG GCGTCGGCGT TCGGCTGACC GATCTGGTGC AGCTCTTCAG CGGCGTCGCG
CGCCTCGGCA GCGTCGTGCC GTTGCGGGAA ATCGCCAGCG ATGCCAAGGA CGAACGCGAG
ACTCTGCGAC TCCTGGATAA AGTCGCGGCC TGGCAGGTCG GCAACGTCCT GCTCGGCACC
CCGCCGCCGG ACAACGCCGC CCGCAACCAG ATCGCGTTCA AGACCGGCAC CTCTTACGGC
TATCGCGACG CCTGGTCGGT GGGTTTCGAC GGCCGGATGA CGATCGGCGT CTGGGTCGGC
CGGCCCGACG GCGCGCCGGT GCCGGGCCTG ATCGGCCGCG TCGCCGCCGC GCCGGTGCTG
TTCGACGCCT TCGCCCGCAC CGGCCAATTG CGCGCGCCGC TGCCGAAACC GCCACGCGGA
ACGCTGATCG CCGGCAACGC CCAGTTGCCG CTGCCGCTGC GCCGGTTCCG GCCGGCGGGC
GAGCTGGTTC GTGCCGGCGG CGAGCAGGCT TTGAAGATCC AGTTTCCGCT GAACGGCTCG
CGGATCGACG CGCTGAGCCA GGCGTCCACC GGCGCACTGC CCGTCAAGGT CTCCGGCGGC
GTGCTGCCGA TGACGGTGAT GGTCAACGGC CTGTCGGCCG GCGAAATCGA CGGCCGGCGT
CAGCGGCTGA TCGCGCCGCC CGGCCCGGGC TTCGTCCGGC TCACCGTGAT GGACGCCGTC
GGCGCGGCGG CAACAGTCGT GGTGAGAATC CAGTAG
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| Protein sequence | MSGDRLTRLL SSLRGAERRS NPEVATVAPG LLRSARNDGW KGWWWIKTTA IVSAVLVIAA
IGAIAAYVAS LGPLPLDEAR RTSVSVVDRQ GKLLRAYAMA DGRWRLPVDA QTQVDPRYLT
QLIAYEDKRF WSHRGVDPWA IGRAALQLAT HGQIVSGGST ITMQLARLME PRRERSLSAK
LRQMVRAIEL ERTLSKPQIL DLYLALAPYG GNLEGIRAAS IAYFGKEPKR LTLAESALLV
AIPQSPERRR LDRHPATAQA ARDRVLTRLV EDQVVSTEDA AQARAVPVAR ARKPMPVLAP
HSADQATAVI KDKPVIRLTL DAGIQHALEA LARDRAVALG PDISIGIVAV DNETGDVLAH
VGSADYFDDR RAGQVDMTRA VRSPGSTLKP FIYGLAFEDG FVHPESLIDD RPVRYGAYAP
ENFDMTFQGT VPVRKALQLS LNVPAIELLD RVGPHRLASR LKQAGVGLVL PKDEAPGLAM
GLGGVGVRLT DLVQLFSGVA RLGSVVPLRE IASDAKDERE TLRLLDKVAA WQVGNVLLGT
PPPDNAARNQ IAFKTGTSYG YRDAWSVGFD GRMTIGVWVG RPDGAPVPGL IGRVAAAPVL
FDAFARTGQL RAPLPKPPRG TLIAGNAQLP LPLRRFRPAG ELVRAGGEQA LKIQFPLNGS
RIDALSQAST GALPVKVSGG VLPMTVMVNG LSAGEIDGRR QRLIAPPGPG FVRLTVMDAV
GAAATVVVRI Q
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