| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2911 |
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| Symbol | |
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| ID | 3910707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3318876 |
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| End bp | 3320081 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884814 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_486524 |
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| Protein GI | 86750028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.469309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGATCG ACGCCCGACC ACCGCCGTCG CAATTCGGCG CGAGATTGCG CCGGGCGCTC
GGCGGTCGAT CCGGCTGGAA GGGGCTGATC GCGCAGCTGC TGTTCGTCGC GGTGCTGTGC
TGGATCGGCT ACGCGATCGT CGACAATGCG CGCGACAACC TCACCAATCA GCGGATCGCG
TCCGGCTTCG GCTTCATGTC GCAGACCGCC GGCTTCGGCG TCAGCCAGAC GCTGATCCCG
TATGCGGAGT CGGACAGCTA CACCCGGGTT TTTCTGGTCG GCCTCGTCAA TACGCTGGTG
GTGTCGGTGA TCGGCATCTT CTTCGCGACG CTGCTCGGCT TTCTCGTGGC ACTCGGCCGG
CTGTCGCCGA ACTGGCTGAT CGCGCGGATC GCCGGCGGTT ATGTCGAGCT GATCCGCAAC
CTGCCGCTGC TGTTCCAGAT CCTGTTCTGG TATCTCGCCG TGCTCGGCGC GCTGCCGGGC
CCGCGCCAGA GTGTGTCGGT GTTCGACAGC TTCTTTCTGT CGAACCGCGG CATCGTCGTG
CCGCGTCCGG TCGGCGAAGC CGGGCTCGAC GGTTTTCTCG TGGCGCTGCT GATCGCCGTG
ATCGCGGCGA TCGTGCTGCC GATCTATGCG CGGCGGCGAT TGTTCGACAC CGGCAAGCCG
ATGAAGGTCT GGCCGTGGAG CGTCGGCCTG CTGATCGGCC TGCCGCTGAT CGCGGTGCTG
ATCTTCGGCC GGCCGTTCGG CTTTGAAATC CCGGCGCTGA AAGGTTTCAA TTTCGCCGGC
GGCGCGCGGA TCGCGCCGGA GTTCGTGGCG CTGACGCTGG CGCTCGCGAC CTACACGGCG
GGGTTCATCG CCGAGATCGT CCGCGCCGGC ATCCTGTCGG TGCACAAGGG CCAGATGGAA
GCCGGCGCGT CGCTCGGCCT GTCGCGCGGT GCGACGTTGC GGCTCGTCGT GATCCCGCAG
GCGATGCGGG TGATCCTGCC GCCACTGACC AACCAATATC TCAACCTGAC CAAGAATTCG
TCGCTGGCGG TGGCGATCGG CTATCCCGAT CTGTTCTCGG TGTTCGCCGG CACCACGCTG
AGCCAGACCG GGCAGGCGAT CGAGGTGATC GCGATCACCA TGGGCGTGTA TCTGCTGATC
TCGCTGATCA CCAGCGCGCT GATGAGCCTG TACAGTTGGC GGATCAACCG GAGCATGGGC
GCATGA
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| Protein sequence | MAIDARPPPS QFGARLRRAL GGRSGWKGLI AQLLFVAVLC WIGYAIVDNA RDNLTNQRIA
SGFGFMSQTA GFGVSQTLIP YAESDSYTRV FLVGLVNTLV VSVIGIFFAT LLGFLVALGR
LSPNWLIARI AGGYVELIRN LPLLFQILFW YLAVLGALPG PRQSVSVFDS FFLSNRGIVV
PRPVGEAGLD GFLVALLIAV IAAIVLPIYA RRRLFDTGKP MKVWPWSVGL LIGLPLIAVL
IFGRPFGFEI PALKGFNFAG GARIAPEFVA LTLALATYTA GFIAEIVRAG ILSVHKGQME
AGASLGLSRG ATLRLVVIPQ AMRVILPPLT NQYLNLTKNS SLAVAIGYPD LFSVFAGTTL
SQTGQAIEVI AITMGVYLLI SLITSALMSL YSWRINRSMG A
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