Gene RPB_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2904 
Symbol 
ID3910700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3310905 
End bp3312218 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content66% 
IMG OID637884807 
Productamine oxidase 
Protein accessionYP_486517 
Protein GI86750021 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG CAGTTGTTGG AACGGGAATC GCAGGCAATG CCGCCGCTTG GGCACTGTCG 
TCGCGATATC CCGTGACGGT CTATGAGCGC GAATTGCGCG CGGGCGGTCA CAGCCACACC
GTCACGGTCG ATTACGGCGG CACACCGATC CCGGTCGATA TCGGCTTCAT CGTCTACAAC
CAGCTCAATT ATCCCGATCT CACCGCGCTG TTCGCCCATC TCGGCATCGA AACGGTCGAG
AGCTGCATGA GCTTCGCGGT CTCGGCAGAT GCCGGCCGAT TCGAATGGAA AGGCGGCGGC
TCGAACTGGC TCGAAACCGC GCGCGGCCTG TTCGCGCAGC CGAGCAATCT GCTGTCGCCG
TCTTATCTGA AGATGCTGCG GCACATTCTG GTGTTCAACG AGCAGAGCGT CGCCGACTTC
AAGTCCGGCG CGCTGGCGGG TCTGTCGCTC GGCGAATATT TCACCAGTCG AAAATTCGCG
CCGCGGCTCT TGACCGATTA TCTGGCGCCG ATGGGCGCTG CGATCTGGTC GGCGCCGGCG
GCGGAAATCC TCGACTTCCC GGCCGAGAAT TTCGTCGCCT TCTTCAACAA CCATCGGCTG
CTGCATTACG AACGTCCGAT CTGGCGCACC GTCAAGGGCG GCAGCGCGCG CTATGTCGAG
AAGCTCACCG CGGGCTTCAA GGATCATCTC CGGCTCGGTG CGGCGGTGAC GGCGATCGAG
CGCTCGCCGA AGGGCGTGAT CGTGCGCGAC AGCCTCGGCC ACGCCGACGT CTATGATCAC
GTCGTGATCG GCGCGCACAG CAATCAGGCG CTGGCGATGC TGGCCGATCC CAGCGACGAG
GAGCGGGATA TTCTGGGCGC GATCGGCTAT GCGCCGAACC TGGTCTATCT GCACCGCGAT
CCGCGGCTGA TGCCGAAGCG CAAGCACGCC TGGGCGTCGT GGAACTTCCT GCGCTGGCAG
CGCGACGGCT CGCCGGTCAA CGACGTCGCG GTGACCTATT GGATGAACCG GCTGCAGGGC
ATCGACGACT CCAAGCCGTT GTTCGTCAGC CTCAACCCGC CGTTCGCGCC CGATCCGGCC
TTGACCTTCG GGCGTTACGA CTGCGACCAT CCGCAGTACA CGGCCGCAGC CTTCGCCGCG
CAGCGCCGGA TCGGCGAGAT CCAGGGCCAG CGCCGCACCT GGTTCTGCGG CGCCTGGACC
GGCTACGGCT TCCACGAGGA CGGGCTGCGC TCCGGCCTCG CGGTTGCCGA AAATCTGGGG
GCGCCGGTGC CGTGGCGGGC GCCGCGGCCC GAAGTCAGGG AAGCCGCGGA ATAA
 
Protein sequence
MRVAVVGTGI AGNAAAWALS SRYPVTVYER ELRAGGHSHT VTVDYGGTPI PVDIGFIVYN 
QLNYPDLTAL FAHLGIETVE SCMSFAVSAD AGRFEWKGGG SNWLETARGL FAQPSNLLSP
SYLKMLRHIL VFNEQSVADF KSGALAGLSL GEYFTSRKFA PRLLTDYLAP MGAAIWSAPA
AEILDFPAEN FVAFFNNHRL LHYERPIWRT VKGGSARYVE KLTAGFKDHL RLGAAVTAIE
RSPKGVIVRD SLGHADVYDH VVIGAHSNQA LAMLADPSDE ERDILGAIGY APNLVYLHRD
PRLMPKRKHA WASWNFLRWQ RDGSPVNDVA VTYWMNRLQG IDDSKPLFVS LNPPFAPDPA
LTFGRYDCDH PQYTAAAFAA QRRIGEIQGQ RRTWFCGAWT GYGFHEDGLR SGLAVAENLG
APVPWRAPRP EVREAAE