| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2903 |
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| Symbol | |
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| ID | 3910699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3309023 |
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| End bp | 3310471 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884806 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_486516 |
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| Protein GI | 86750020 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TATTGCGCTA CCTTGGTCGG TCCGTGAGGA TGGTTGCCGC CTCGGCGTTC
GTCCTCGGCG CCGGCGGCTG CATCCTGACC AAGGACCTGC CGGACCCGGC GCTGGATCTG
CCGCCGCGCT ACAAGTCGGC GTCGCTGAAC ACCGTCGACG CGCCGCCGGC GCTCGACTGG
TGGCGCGGCT TCCGTTCGGC CGAGCTGACG CAATTGATGG AAGAGGCGCA GACCGTCAAT
CTCGACATTG CCGCGGCGAC CGCGCGCATC CTGCAGGCGG ACGCCCAGGC GCGGATCACC
GGGGCGGCGC TGCTGCCCTC GATCACCGGC AACGGCAGCG GCTCGCAGAA CAAGACCTCG
GGCAGCAATG TCTCGAACAC CACGATCGCC GGCCGCCGCT ACGCCACCTA TTCGGCATCG
CTGAGCGCGA GCTACGAAAT CGATTTCTGG GGCAAAAATC ACGACGCCGC GCTGGCGGCC
GAGGAGACCG CGACCGCCAC GAGGTTCGAC CGCGACGTGG TCGCGCTGAC CACGATGGCG
AGCGTCGCCA ACGCCTATTT CCAGGTGCTG GCGACCCAGG ACCGGCTCCG CACCTCGCGC
GAGAACATCG CCAGCGCGCA GCGGATTCTC GACGCCATCA AGCAGCGGCT CGCCGCCGGC
ACCGGTAGCG ATCTCGACGT CGCCCAGCAG GAGAGCGTGC TGGCGAATCA GCGCGCCGCG
GTGCCGCCGC TGCAATTGAC GCTGGCGCAG AACATCAACA CGCTGGCGAC GCTGGTGTCC
CGTCCGCCGG AAAGCGTGAA GATCGTCGGC GGCTCGCTGA ACCGGATCTC GTCGCCGCGG
GTGACGCCGG GGCTGCCGTC CGAACTGCTG ACGCAGCGGC CGGACATCCG CCGCCAGGAG
GCGCAGCTCG CGTCCGCGAC GGCCAATGTC GGCAGCGCGC GGGCGCAGTT CTTCCCGAGC
ATTCAATTGA CCGGGCAGGG CGGCTATCAG AGCGCGGTGC TGGCCTCGCT GTTCACGCCG
CAGGCGACCT TCTCCAGCCT CGCGGCCGGG CTGACCCAGC CGATCTTCGA CGGCGGCCGC
ATCCAGGGCA ATTTCGACCT GACCCGGGCG CAGCAGGAGG AACTGCTGCA GACCTACCGC
AAGACCGTGG TGTCGGCCTT CGCCGACGTC GACAACGCGC TCGAATCGAT CAAGCAGAAC
ACCGAGCGGC TGCGTCTGCA GCGACAGGTG GTGGCGTCGT CGCGGCGGGC TTTCAATTTG
GCCGAACAGC AACTACGTGC AGGAACGGCC GACATCGTCA CCGTTCTCAA CACGCAACTG
ACACTGTTCA CGGCGGAAGA TGCGCTGATC CAGACGCAAT TGGCGCGCTA TCTGGCGATC
GTCAGCCTGT TTCAGGCGCT CGGGGGCGGC TGGGAGCCGA GGATGGAAAG ACCGCTCAAT
GCTCTTTAA
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| Protein sequence | MSTILRYLGR SVRMVAASAF VLGAGGCILT KDLPDPALDL PPRYKSASLN TVDAPPALDW
WRGFRSAELT QLMEEAQTVN LDIAAATARI LQADAQARIT GAALLPSITG NGSGSQNKTS
GSNVSNTTIA GRRYATYSAS LSASYEIDFW GKNHDAALAA EETATATRFD RDVVALTTMA
SVANAYFQVL ATQDRLRTSR ENIASAQRIL DAIKQRLAAG TGSDLDVAQQ ESVLANQRAA
VPPLQLTLAQ NINTLATLVS RPPESVKIVG GSLNRISSPR VTPGLPSELL TQRPDIRRQE
AQLASATANV GSARAQFFPS IQLTGQGGYQ SAVLASLFTP QATFSSLAAG LTQPIFDGGR
IQGNFDLTRA QQEELLQTYR KTVVSAFADV DNALESIKQN TERLRLQRQV VASSRRAFNL
AEQQLRAGTA DIVTVLNTQL TLFTAEDALI QTQLARYLAI VSLFQALGGG WEPRMERPLN
AL
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