| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2902 |
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| Symbol | |
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| ID | 3910698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3307639 |
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| End bp | 3309033 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637884805 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_486515 |
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| Protein GI | 86750019 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.56576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTTA AGCCGGAGAC CAACGACGCG TCCGGCACCG GGCCCGGCGC AAACAGTCTG
GCGTCGCGCG CCCGGCGGCG GACGGTGTCG TTGCTGGTGA CCGCGATCAT CCTCGCCGGG
CTCGGCTACA TCGCCTGGAC CGCGTTCCAG ACCAAGCCGG CGGCCGTCAC GGGGCGCGGT
GGACCGCGTG GCGACATGGC GGTGCCGGTG CTGGCGGCGA CGCCCAAGAT TCAGGACGTG
CCGGTGTATC TCGACGGCGT CGGCTCGGTG AAGGCGCTCG CCAATGTCAC CGTGCGCGCC
CAGGTCGACG GCAAGCTGGT CGCGGTGAAC TTCACCGAAG GTCAGGACGT CAAGGCCGGG
GATGTGCTGG CCGAGATCGA TCCGGCGATC TATCAGGCGC AATACGATCA GGCGGTGGCG
AAAAAGGCGC AGGACGAGGC GCAGCTCGCC AACGCCAAGA TCGATCTCGC CCGCTATCAG
CAACTCGCGG CGTCGAACGC CGGCTCGAAG CAGCAGGCCG ACACCCAGAA GGCGACCGTG
GCGCAGCTCG ACGCGCTGGT GCGCTCCGAT CAGGCGGCGA TCGACAACGC CGCGGCGACG
CTGAGCTACA CCAAGGTGGT GGCGCCGATC TCCGGCCGCG CCGGCCTGCG CCAGGTCGAC
AAGGGCAATC TCGTCAAGTC GGCCGACACC ACCGGCATCG TGGTGATCAC GCAGTTGCAG
CCGATCGCGG TGCAGTTCAG CCTGCCGCAA CAGCAGATCG TGCGCGTCAA CGCCGCGTCG
GCGAAGGGCG CGCTGGCGGT CGACGTGTTC GGCAATGACG GCGTCACCGT CATCGATACC
GGCGTGCTCA GGGGCATCGA CAATCAGGTC GATCAAACCA CCGGCACGGT GAAGCTGAAG
GCGGAATTTC CGAACACCAG ATTCCAGCTC TGGCCCGGGC AATTCGTCAA TGTCCGACTC
AAGGTCGAGA CGCTGAACCA GGTCGTGGTG GTGCCGACCT CGGCGGTGCA GCGCGGACCG
GCCGGGACAT TCAGCTACGT CATCGACCAG GACAATGTGG TGCATGCGCA GCCCGTCAAG
GTGACGCAGC AGAACGAAAC CGAGGCGGTA ATCGCCAGCG GGCTGACGCC CGCGGATCGT
GTCGTCACCA CCGGATTCGC CAATCTGTCC GAGGGTGCCA AGGTCAGGAT CGGCGACGGC
GGCCAGGCGC CGGCCGTCGA TCTGGCGCCG CGCAAGCGCC GCGGCCCGCC CGGCGATCAG
GCCAAGCCGG GCGAAGGTGG CGCCGCCGAA CAGGGCAAGC GCCGCCGCGG CGAGGGCGGC
GCAGGGGCGC CGGGACAGAC CGGGCAGGCG CCCGCGGCGG GCGCCGAACC GGCGGGGGCT
GCGAAGGCGC AGTGA
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| Protein sequence | MLFKPETNDA SGTGPGANSL ASRARRRTVS LLVTAIILAG LGYIAWTAFQ TKPAAVTGRG
GPRGDMAVPV LAATPKIQDV PVYLDGVGSV KALANVTVRA QVDGKLVAVN FTEGQDVKAG
DVLAEIDPAI YQAQYDQAVA KKAQDEAQLA NAKIDLARYQ QLAASNAGSK QQADTQKATV
AQLDALVRSD QAAIDNAAAT LSYTKVVAPI SGRAGLRQVD KGNLVKSADT TGIVVITQLQ
PIAVQFSLPQ QQIVRVNAAS AKGALAVDVF GNDGVTVIDT GVLRGIDNQV DQTTGTVKLK
AEFPNTRFQL WPGQFVNVRL KVETLNQVVV VPTSAVQRGP AGTFSYVIDQ DNVVHAQPVK
VTQQNETEAV IASGLTPADR VVTTGFANLS EGAKVRIGDG GQAPAVDLAP RKRRGPPGDQ
AKPGEGGAAE QGKRRRGEGG AGAPGQTGQA PAAGAEPAGA AKAQ
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