| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2900 |
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| Symbol | |
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| ID | 3910696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3301355 |
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| End bp | 3304468 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884803 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_486513 |
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| Protein GI | 86750017 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0921711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGA TGTCCGGGCC TTTCATCGCC CGACCGGTCG GCACCACGCT GCTGGCGATC
GGGCTGTTTC TGCTCGGCAT GGTGTCCTAC GCCGTGCTGC CGGTGGCGGC GATCCCCAAC
GTCGATTTCC CGATGGTGAT GGTGACGGCG TCGCGGCCGG GCGCGGCACC CTCGGTGATG
GCGGCGACGG TCGCCGCGCC GCTGGAGCGG CGGCTCGGCG AGATCGCGGG GCTGGACAAA
ATCACCTCGA CCAGTTCGCT CGGCACCACG CGGATCCAGT TGCAGTTCTC GATCGGCCGC
AACATCGACA AGGCCGCCCG CGACGTCCAG GCGGCGATCA ACGCCTCGGT CAGCGACCTG
CCGACCGACC TGCCGACGCT GCCGAAATTC CGCAAATTCA ACTCCGCCGC GGCGCCGGTG
TTCATCCTGG CGCTGACCTC CAAGACGATG CCGGTGAGCG CGATCTACGA CGTCGCCGAC
ACCGTGCTGG CGCAACGCAT CTCGCAGGTG CCCGGCGTCG GCGACGTCAC GGTCTCCGGC
GCCGACCAGC CGGCGGTGCG GATCGCGCTC AATCCGGTGG CGCTGTCGAA TGCAGGCATC
GCGACCGACG ACGTTCGCAC CGCGATCATC AACGCCAATC CGGTCGGCCC GGTCGGCACC
TTCGACGGCG ACCGCCAGAG CGAGACGATC GCGACCAATC CGCAGATGCG CACCGCGGCG
CAATTCCGGG ACATCGTGAT CAAAAGCGGC AACGGCAACA CGCTGCGGCT GTCGGACGTC
GCCACGGTGT CCGACGCCAC CCGCAACAGC CGTCAGATCG CCTGGTACAA CAAGCAGCCC
GCGGTGCTGA TCCAGATCAC CAAACAGGGC GACGCCAACG TGATCGAGAC GGTCGATCGC
GTGAAGGCGC TGCTGCCGGA ACTGAAACGC TGGATGCCGG CGTCGGTGGA GATCTCGGTG
GTGACCGACC GCACCGGAAC GATCCGCGCC AGCGTCGACG ACATGCTGTG GACGCTGCTG
GCCACCGCCG TGCTGGTGAT GGTGGTGGTG CTGACCTTCC TCCGGCGGCT GACGCCGACG
ATCGCCGCCG GCGTCTCGGT GCCGCTGGCG CTGGCCGGCA CCTGCGCCGG GATGTGGCTC
ACCGGCTTCT CGATCAACAA TCTGTCGCTG ATGGCGCTGG CGATCGCGGT CGGCTTCGTC
GTCGACGACG CCATCGTGAT GATCGAGAAC ATGTACCGCA ATCTCGAGCG CGGAATGGAG
CCGGTCCGCG CCGCGACCGA AGGGGCGAAG CAGATCGGCT TCACCGTGCT GTCGATCAGC
CTGTCGCTGG TCGCGGCGTT CGCGCCGCTG ATCTTCATGG ACGGGCTGGT CGGCCGGCTG
TTGCGCGAAT TCTCGCTGAC GCTGACCTAT GCGATCGCGG TGTCGACCGT GGTGTCGCTG
ACGGTGACGC CGATGATTTG TGCGCATTTC ATTCGCGCCG AAACGACGCC GCGCCAGCCG
AACTGGTACG ACCGCGTGGT CGACGGCACG CTGAACCGCA TCGTCGGATT CTATGCCTGG
ACGCTGCGCG CGGTACTCGG CTTTCCCGGC CTCACCATGC TGGTGTTCTT CGCCACTATC
GCACTGACCG TGACGCTCTA CGTCAAGGTG CCGAAGGGCT TCTTCCCGAT CGACGATTCG
GGCTTCGTGA TCGGATCGAC GCGCGCTTCG GCCGACGTCT CGTTCCAGGC GATGCGCAAG
CTGCAGGAAC AACTCGCCGA CATCGTGATG GCCGATCCCG CCGTCGCCGG CGTCGGTTCG
GTGCTGGGCG GCGGCGGCGG GCCGGGCGGC GGCGGCTCCA ATCGCGGCAC CATGTTCATC
AATCTCAAGC CGTCGGCGGA GCGCGACGGC GTCACCACGC AGCAGGTGAT CGACCGGCTG
CGCCGCCAGC TCGGCCAGGT CGCCGGCATC CGGCTGTTCA TGTTCGCGGC GCAGGATCTG
CGCGCTGGCG GGCGGCAGAG CGATTCCAAT TATCAGTACA CCATCGCCAG CCCGGACCTC
GATCTGTTGC AGAAATGGGC GCCGATCATC GGCACGCGGA TGCAGACGGT GGAGGGCATC
ACCGACGTCT CCAGCGACCG CGACGACGGC GGCCTCGAAC TGACGCTGTC GATCGACCGC
AACATGGCGT CGCGGCTCGG CGTCTCGGTG CAGGACATCG ACAACGCCCT CAACAACGCG
TTTTCGCAGC GTCAGATCGC GACGATCTAT ACCCAGCGCA ACCAGTATCA GGTGGTGCTG
GAGATCGACC CGAAATTCCA GAACGACCCG ACCGATCTGG ATCGGATCTT CGTCGCCGGC
GCCGATGGCG CGCAGGTGCC GCTGTCGGCG GTGGTGAAGG CCAGACGCGG GCTGTCGCCG
CTGGCGGTGT TCCACTCGCA GTCGATCCCC TCGACCACGG TGTCGTTCAA CCTGCTGCCG
GATGTGCCGT TGCAAGACGC GACGGCCAAT ATCCAGCGCG CGGTCGACGA ATTGCACATG
CCGGAGGGCA TCCGCGGCTC GTTCGACGGC ACCGCCGGCG ATTTCGGCGC CGCCTCCAGC
AAGCAGCCGC TGCTGCTGCT GGCGGCCCTG ATTGCGATGT ACATCGTGCT CGGCGTGCTC
TACGAGAGCC TGGCGCATCC GCTGACGATC ATTTCGACGC TGCCCTCCGC CGGTCTCGGC
GCGCTGCTGG CGCTGTTGGT CACCGGCACG CAACTGACGG TGATCGCGTT CGTCGGCATC
ATCATGCTGA TCGGCATCGT CAAGAAAAAC GGAATCATGA TGGTGGATTT TGCGCTGGAG
GCCGAACGCG TGCGCGGGAT GTCGTCCGCG GACGCGATCT TCGAGGCCTG CATCGTCCGC
TTTCGGCCGA TCCTGATGAC CACGCTGGCC GCCTTGTTCG CCGCGATCCC GCTGGTGGTC
GCGGTCGGGC CCGGCACCGA GCTGCGCCGG CCGCTCGGCA TCACCATCAT CGGCGGATTG
TTGGTGTCGC AGGTGCTGAC GCTGTACACC ACGCCGGTGA TCTATCTGCT GATCGACCGG
GCGCGACAAT GGCGCAGGCG CAAGCCCGCG CCCGTCGCGG CCCCCGCGGA GTAG
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| Protein sequence | MASMSGPFIA RPVGTTLLAI GLFLLGMVSY AVLPVAAIPN VDFPMVMVTA SRPGAAPSVM
AATVAAPLER RLGEIAGLDK ITSTSSLGTT RIQLQFSIGR NIDKAARDVQ AAINASVSDL
PTDLPTLPKF RKFNSAAAPV FILALTSKTM PVSAIYDVAD TVLAQRISQV PGVGDVTVSG
ADQPAVRIAL NPVALSNAGI ATDDVRTAII NANPVGPVGT FDGDRQSETI ATNPQMRTAA
QFRDIVIKSG NGNTLRLSDV ATVSDATRNS RQIAWYNKQP AVLIQITKQG DANVIETVDR
VKALLPELKR WMPASVEISV VTDRTGTIRA SVDDMLWTLL ATAVLVMVVV LTFLRRLTPT
IAAGVSVPLA LAGTCAGMWL TGFSINNLSL MALAIAVGFV VDDAIVMIEN MYRNLERGME
PVRAATEGAK QIGFTVLSIS LSLVAAFAPL IFMDGLVGRL LREFSLTLTY AIAVSTVVSL
TVTPMICAHF IRAETTPRQP NWYDRVVDGT LNRIVGFYAW TLRAVLGFPG LTMLVFFATI
ALTVTLYVKV PKGFFPIDDS GFVIGSTRAS ADVSFQAMRK LQEQLADIVM ADPAVAGVGS
VLGGGGGPGG GGSNRGTMFI NLKPSAERDG VTTQQVIDRL RRQLGQVAGI RLFMFAAQDL
RAGGRQSDSN YQYTIASPDL DLLQKWAPII GTRMQTVEGI TDVSSDRDDG GLELTLSIDR
NMASRLGVSV QDIDNALNNA FSQRQIATIY TQRNQYQVVL EIDPKFQNDP TDLDRIFVAG
ADGAQVPLSA VVKARRGLSP LAVFHSQSIP STTVSFNLLP DVPLQDATAN IQRAVDELHM
PEGIRGSFDG TAGDFGAASS KQPLLLLAAL IAMYIVLGVL YESLAHPLTI ISTLPSAGLG
ALLALLVTGT QLTVIAFVGI IMLIGIVKKN GIMMVDFALE AERVRGMSSA DAIFEACIVR
FRPILMTTLA ALFAAIPLVV AVGPGTELRR PLGITIIGGL LVSQVLTLYT TPVIYLLIDR
ARQWRRRKPA PVAAPAE
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