Gene RPB_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2898 
Symbol 
ID3910694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3299593 
End bp3300447 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID637884801 
Productexodeoxyribonuclease III 
Protein accessionYP_486511 
Protein GI86750015 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.696489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCT CCTGCAATGA ACAGCCATGC AACTGCCGCC CGACGCACGC GTTCCCTCGT 
GGAGCGAGCG AGGAAGCGCC CCTGAAGATC GCCACCTTCA ACGTCAACAA CGTCAACAAG
CGGCTGCCGG TGCTGCTCGG CTGGCTGAAG GCGGCGAAGC CGGACATCGT CTGCCTGCAG
GAGCTGAAGG CGGCGCAGGA CGACTTTCCG GAAGCGGCGC TGCTCAAGGC TGGCTATTCC
GCCGCCTGGG TCGGACAGAA GACCTGGAAC GGTGTCGCGA TTCTCGCCCG CAAGCGCGCC
GAGATCGTGG TCACCCGCCG GGCCTTGCCG GGCGACGCCA AGGATCTGCA GAGCCGCTAT
CTGGAAGCCG CGGTCGCCGG GATGATCGTC GGCTGCCTGT ACGCGCCGAA CGGCAATCCA
CAGCCCGGGC CGAAATTCCA GTACAAGCTG GCCTGGATGA AACGGCTCAA CCGGCATGCG
GCCAAGCTGC TGAAGAGCGG TGTGCCGGTG GTGCTGGCCG GCGATTTCAA CGTGGTGCCG
ACGCCGGCCG ACATCTACCC GACGCGGTCG TGGGACAAGG ATGCGCTGCT GCAGCCGGAG
CCGCGGGCGC TGTTCGCCGC CTTGCTGAAG CAGGGCTGGA CTGACGCGCT GCGCGCGCTG
CATCCCGAGC AGGCGCCGTA CACGTTCTGG ACCTACTGGC GAAACCGGTT CGAGCGCGAC
CACGGGCTGC GGATCGATCA TTTGCTGCTC GACCCGGCCA GTGCGCAGCG GCTGGCGCGC
GGCGGCGTCG ACCGCGCGAT CCGCGGCGCT CCGGACGCCA GCGACCATGC GCCGGCCTGG
ATCGTGCTGA AATAG
 
Protein sequence
MMASCNEQPC NCRPTHAFPR GASEEAPLKI ATFNVNNVNK RLPVLLGWLK AAKPDIVCLQ 
ELKAAQDDFP EAALLKAGYS AAWVGQKTWN GVAILARKRA EIVVTRRALP GDAKDLQSRY
LEAAVAGMIV GCLYAPNGNP QPGPKFQYKL AWMKRLNRHA AKLLKSGVPV VLAGDFNVVP
TPADIYPTRS WDKDALLQPE PRALFAALLK QGWTDALRAL HPEQAPYTFW TYWRNRFERD
HGLRIDHLLL DPASAQRLAR GGVDRAIRGA PDASDHAPAW IVLK