Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2898 |
Symbol | |
ID | 3910694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3299593 |
End bp | 3300447 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884801 |
Product | exodeoxyribonuclease III |
Protein accession | YP_486511 |
Protein GI | 86750015 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.696489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCCT CCTGCAATGA ACAGCCATGC AACTGCCGCC CGACGCACGC GTTCCCTCGT GGAGCGAGCG AGGAAGCGCC CCTGAAGATC GCCACCTTCA ACGTCAACAA CGTCAACAAG CGGCTGCCGG TGCTGCTCGG CTGGCTGAAG GCGGCGAAGC CGGACATCGT CTGCCTGCAG GAGCTGAAGG CGGCGCAGGA CGACTTTCCG GAAGCGGCGC TGCTCAAGGC TGGCTATTCC GCCGCCTGGG TCGGACAGAA GACCTGGAAC GGTGTCGCGA TTCTCGCCCG CAAGCGCGCC GAGATCGTGG TCACCCGCCG GGCCTTGCCG GGCGACGCCA AGGATCTGCA GAGCCGCTAT CTGGAAGCCG CGGTCGCCGG GATGATCGTC GGCTGCCTGT ACGCGCCGAA CGGCAATCCA CAGCCCGGGC CGAAATTCCA GTACAAGCTG GCCTGGATGA AACGGCTCAA CCGGCATGCG GCCAAGCTGC TGAAGAGCGG TGTGCCGGTG GTGCTGGCCG GCGATTTCAA CGTGGTGCCG ACGCCGGCCG ACATCTACCC GACGCGGTCG TGGGACAAGG ATGCGCTGCT GCAGCCGGAG CCGCGGGCGC TGTTCGCCGC CTTGCTGAAG CAGGGCTGGA CTGACGCGCT GCGCGCGCTG CATCCCGAGC AGGCGCCGTA CACGTTCTGG ACCTACTGGC GAAACCGGTT CGAGCGCGAC CACGGGCTGC GGATCGATCA TTTGCTGCTC GACCCGGCCA GTGCGCAGCG GCTGGCGCGC GGCGGCGTCG ACCGCGCGAT CCGCGGCGCT CCGGACGCCA GCGACCATGC GCCGGCCTGG ATCGTGCTGA AATAG
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Protein sequence | MMASCNEQPC NCRPTHAFPR GASEEAPLKI ATFNVNNVNK RLPVLLGWLK AAKPDIVCLQ ELKAAQDDFP EAALLKAGYS AAWVGQKTWN GVAILARKRA EIVVTRRALP GDAKDLQSRY LEAAVAGMIV GCLYAPNGNP QPGPKFQYKL AWMKRLNRHA AKLLKSGVPV VLAGDFNVVP TPADIYPTRS WDKDALLQPE PRALFAALLK QGWTDALRAL HPEQAPYTFW TYWRNRFERD HGLRIDHLLL DPASAQRLAR GGVDRAIRGA PDASDHAPAW IVLK
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