Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2885 |
Symbol | |
ID | 3910679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3285487 |
End bp | 3286692 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637884786 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_486498 |
Protein GI | 86750002 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.451878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAC CTCCCCGTAC CGCCGCCATC ATCGTCGCCG CCGGCCGCGG CCTCCGCGCT GGCGCGGGCG GCCCCAAACA ATACCGCACG CTCGCCGGAC GGCCGGTGAT TGCCAGGGCT TTGCAGCCGT TTTGTACGCA CCCGGAGGTC TTTGCGGTCC AGCCCGTGAC CAATCCGGAC GACACCGCGA CGTTCAACGA GGCGGTCGCC GGGCTCGATT TCCGACCTGC GGTCGGTGGC GGCGCGACCC GGCAGGCGTC GGTTCGCGCC GGGCTGGAAG CGCTGGCCGA ACTGAACCCC GACATCGTGC TGATCCACGA CGCGGCGCGT CCCTTTGTCA CGCCGGATCT GATCTCGCGT GCGATCGTCG CGGCCGGCCA GACCGGCGCG GCGCTGCCGG TGATCGCGGT CAACGACACC GTCAAGCAGG TCGATGCCGA GGGCTGCGTC GTGGCGACGC CGGACCGCGC GCAATTGCGG ATCGCGCAGA CGCCGCAGGC CTTCCGTTTC GACGTGATTC TCGACGCGCA CCGCCGCGCC GCGCGCGATG GTCGCGATGA CTTCACCGAC GACGCCGCGA TCGCCGAATG GGCGGGATTG ACGGTGTCCA CGTTCGAGGG CGATGCTGCC AACATGAAAC TGACCACGCC GGAAGACTTC TCGCGCGAAG AGAGCCGCCT CACCGCGGCG CTCGGCGACA TCCGCACCGG CACCGGCTAC GACGTCCACG CCTTCGGCGA CGGCGATCAC GTCTGGCTGT GCGGGCTGAA GGTGCCGCAC AATCGCGGCT TCCTGGCGCA TTCCGACGGC GACGTCGGAC TGCACGCGCT GGTCGACGCC ATCCTCGGCG CGCTGGCCGA CGGCGACATC GGCTCGCACT TCCCGCCGAC CGACCCGCAA TGGAAGGGCG CGGCCTCCGA CAAGTTCCTG AAATACGCGG TCGACCGCGT CGCCGCGCGC GGCGGCCGCA TCGCCAATCT CGAAGTGACG ATGATCTGCG AGCGGCCGAA GATCGGCCCG CTGCGCGACC CGATGCGGCA GCGCATCGCC GAGATCACCG GCGTTCCGGT GTCGCGCGTC GCCGTGAAGG CGACCACCAG CGAGCGGCTC GGCTTCACCG GCCGCGAGGA AGGCATCGCC GCCACCGCGT CGGCCACCAT CCGGCTGCCT TGGTCCCCTT GGGGCGCCGA AGGACAGGCC TCCTGA
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Protein sequence | MQKPPRTAAI IVAAGRGLRA GAGGPKQYRT LAGRPVIARA LQPFCTHPEV FAVQPVTNPD DTATFNEAVA GLDFRPAVGG GATRQASVRA GLEALAELNP DIVLIHDAAR PFVTPDLISR AIVAAGQTGA ALPVIAVNDT VKQVDAEGCV VATPDRAQLR IAQTPQAFRF DVILDAHRRA ARDGRDDFTD DAAIAEWAGL TVSTFEGDAA NMKLTTPEDF SREESRLTAA LGDIRTGTGY DVHAFGDGDH VWLCGLKVPH NRGFLAHSDG DVGLHALVDA ILGALADGDI GSHFPPTDPQ WKGAASDKFL KYAVDRVAAR GGRIANLEVT MICERPKIGP LRDPMRQRIA EITGVPVSRV AVKATTSERL GFTGREEGIA ATASATIRLP WSPWGAEGQA S
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