| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2882 |
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| Symbol | |
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| ID | 3910676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3281606 |
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| End bp | 3283048 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884783 |
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| Product | nitrogen metabolism transcriptional regulator NtrC |
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| Protein accession | YP_486495 |
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| Protein GI | 86749999 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.173418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAG GTAGTATTCT TGTCGCCGAT GACGACACCG CCATCCGCAC GGTGTTGAAC
CAGGCGCTGT CGCGCGCCGG ATACGAAGTG CGGCTGACCG GCAATGCCGC GACGCTGTGG
CGCTGGGTCA GCCAGGGCGA GGGCGATCTG GTGATCACCG ACGTGGTGAT GCCGGACGAA
AACGCCTTCG ACCTGCTGCC GCGGATCAAG AAGATGCGGC CGAACCTGCC GGTCATCGTG
ATGAGCGCGC AGAACACCTT CATGACCGCG ATCCGCGCCT CGGAGAAGGG CGCCTACGAA
TATCTGCCGA AGCCGTTCGA CCTCAAGGAG CTGATCGCGA TCGTCGGCCG CGCGCTGGCC
GAGCCGAAGG AGCGCTCCAG CAACCAGAAC GACGAGAGCG AATTCGATTC GATCCCGCTG
GTCGGCCGCT CGCCGGCGAT GCAGGAAATC TACCGCGTGC TGGCGCGGCT GATGCAGACC
GACCTCACCG TGATGATCTC CGGCGAGAGC GGCACCGGCA AGGAACTGGT GGCGCGCGCG
CTGCACGATT ACGGCAAGCG CCGCAACGGC CCGTTCGTCG CGGTCAACAT GGCGGCGATC
CCGCGCGACC TGATCGAGTC GGAATTGTTC GGCCACGAGC GCGGCGCCTT TACCGGTGCC
AACACCCGCG CCTCCGGCCG GTTCGAACAG GCCGAGGGCG GCACGCTGTT TCTCGACGAG
ATCGGCGACA TGCCGATGGA GGCGCAGACG CGGTTGCTGC GGGTGCTGCA GCAGGGCGAA
TACACCACCG TCGGCGGCCG CACCCCGATC AAGACCGACG TGCGGATCGT TGCAGCCTCC
AACAAGGATT TGCGCATCCT GATCCAGCAG GGTCTGTTCC GGGAGGATTT GTTCTTTCGT
CTCAACGTGG TGCCGCTGCG GCTTCCTCCA TTGCGCGAAC ACATCGAGGA TCTGCCGGAC
CTGGTGCGGC ACTTCTTCGC GCTGGCGGAG AAGGACGGCC TACCGGCCAA GAAGCTCGAC
AGCGCGGCGC TGGAGCGGAT GAAGCAGCAT CGCTGGCCGG GCAACGTCCG CGAGCTGGAG
AATCTGGCGC GGCGGCTGGC GGCGCTGTAT CCGCAGGACG TCATCACCGC CTCGGTGATC
GACGGCGAAC TGGCACCGCC CGCGGTGGTG TCCGGCGGCA GCGTCGCCCA CACCGTCGAC
AATCTCGGCG GAGCGGTCGA AATGTACCTT TCGTCGCATT TTTCGGGCTT CCCGAACGGC
GTCCCGCCGC CGGGGCTCTA CCATCGCGTG CTGCGCGAGA TCGAAGTGCC GCTCTTGACC
GCGGCGCTGG CGGCGACTCG CGGCAACCAG ATCAGGGCGG CCGATCTGCT CGGTCTGAAC
CGCAATACGC TGCGGAAGAA GATCCGCGAC CTCGATATTC AGGTTTATCG GACCGGCGGC
TGA
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| Protein sequence | MPAGSILVAD DDTAIRTVLN QALSRAGYEV RLTGNAATLW RWVSQGEGDL VITDVVMPDE
NAFDLLPRIK KMRPNLPVIV MSAQNTFMTA IRASEKGAYE YLPKPFDLKE LIAIVGRALA
EPKERSSNQN DESEFDSIPL VGRSPAMQEI YRVLARLMQT DLTVMISGES GTGKELVARA
LHDYGKRRNG PFVAVNMAAI PRDLIESELF GHERGAFTGA NTRASGRFEQ AEGGTLFLDE
IGDMPMEAQT RLLRVLQQGE YTTVGGRTPI KTDVRIVAAS NKDLRILIQQ GLFREDLFFR
LNVVPLRLPP LREHIEDLPD LVRHFFALAE KDGLPAKKLD SAALERMKQH RWPGNVRELE
NLARRLAALY PQDVITASVI DGELAPPAVV SGGSVAHTVD NLGGAVEMYL SSHFSGFPNG
VPPPGLYHRV LREIEVPLLT AALAATRGNQ IRAADLLGLN RNTLRKKIRD LDIQVYRTGG
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