| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2878 |
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| Symbol | hfq |
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| ID | 3910672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3276456 |
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| End bp | 3276704 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637884779 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_486491 |
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| Protein GI | 86749995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.326313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCAG ACCGCGCACA AAATCTACAA GACACCTTCC TGAACCACGT TCGAAAGACC
AAGACTCCTT TGACGATTTT CCTGGTGAAC GGGGTCAAAT TGCAAGGCAT TGTCACTTGG
TTCGATAATT TTTGCCTGTT GCTGCGGCGC GATGGTCATT CGCAGCTGGT CTACAAGCAT
GCGATTTCGA CGATTATGCC AGGCGCGCCG ATCCAGTTGT TCGAAGGCGG CGAGGATTCT
CCAGCTTGA
|
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| Protein sequence | MAADRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH
AISTIMPGAP IQLFEGGEDS PA
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