Gene RPB_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2870 
SymbolqueA 
ID3910664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3268224 
End bp3269378 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content70% 
IMG OID637884771 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_486483 
Protein GI86749987 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGC TTGACCCGGG CATCCATCTT TCGAAGAGGA TGGATCGCCG GATCAAGTCC 
GGCGATGACG GATACCGGAT GCGCACCGAC CTGTTCGACT TCGACCTGCC TGCCGAGAAC
ATCGCGCTGC GGCCGATGAG CCCGCGCGAT GCCGCGCGGA TGCTGGTGGT GCGCCCCGGC
GCGGCGCCGG AGGATCGCGT CGTGCGCGAC CTGCCGGCGC TGCTGCAGCC CGGCGATCAG
CTCGTCGTCA ACGATACGCG GGTGATCGCC GCGCAGCTCT CAGGCCGCCG GATCGGCCGC
GCCACCGAGC CGAAGATCGA GGCGACGCTG ATCAAGCGGC TCGACGGCTC GCGCTGGCAG
GCGCTGGTCA AGCCGGCGAA GAAGCTCGCC GAGGGCGACG TCGTCCGCTT CGGCCATGAC
GGGCGGGTCT GTCTGCTCGG CCATCTCGAC GCCACCGTCG AGGTCAAGGG CGAGGCCGGC
GAGGTGACGC TGGCGTTCTG CTTCCACGGG CCCGCGCTCG ATCAGGCGAT CGCCGAGCTC
GGCGCGACGC CGCTGCCGCC CTATATCGCG TCCAAGCGCG CGCCCGACGA TCGGGACGCG
GCCGACTATC AGACCATGTT CGCCGCCAAC GAGGGCGCCG TCGCGGCGCC GACCGCGGGG
CTGCACTTCA CGCCGGAACT CGACGCGGCA CTCGCGGCGC GGGGCGTGAC GGTGCACCGG
GTGACGCTGC ATGTCGGGGC GGGGACGTTC CTGCCGGTGA AGACCGACGA CACCGCCGAG
CATCGGATGC ACGCCGAATG GGGCACGATC GGCCGTGACA CCGCCGCGGC GCTGAACGCG
GCGCGCGCGC AAGGCGGCCG CATCGTCGCG GTCGGCACCA CCTCGCTGCG GCTGCTGGAA
AGCGCGGCGC GCGACGACGG CACGATCGCG CCGTTCGCCG ACGAAACCGC GATCTTCATC
ACGCCGGGCT ACAAATTTCG TGCGGTCGAC GTGCTGATGA CCAATTTCCA TCTGCCGCGG
TCGACGCTGT TCATGCTGGT GTCTGCGTTC TGCGGGCTGG AGACGATGCA GGCGGCCTAC
CGCCACGCCA TCGAAACCGG CTATCGGTTC TATTCCTATG GCGACGCCAG CCTGCTGTTC
CGGGAGCCCA CATGA
 
Protein sequence
MPGLDPGIHL SKRMDRRIKS GDDGYRMRTD LFDFDLPAEN IALRPMSPRD AARMLVVRPG 
AAPEDRVVRD LPALLQPGDQ LVVNDTRVIA AQLSGRRIGR ATEPKIEATL IKRLDGSRWQ
ALVKPAKKLA EGDVVRFGHD GRVCLLGHLD ATVEVKGEAG EVTLAFCFHG PALDQAIAEL
GATPLPPYIA SKRAPDDRDA ADYQTMFAAN EGAVAAPTAG LHFTPELDAA LAARGVTVHR
VTLHVGAGTF LPVKTDDTAE HRMHAEWGTI GRDTAAALNA ARAQGGRIVA VGTTSLRLLE
SAARDDGTIA PFADETAIFI TPGYKFRAVD VLMTNFHLPR STLFMLVSAF CGLETMQAAY
RHAIETGYRF YSYGDASLLF REPT