| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2854 |
|---|
| Symbol | |
|---|
| ID | 3910647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3252407 |
|---|
| End bp | 3254233 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637884754 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_486467 |
|---|
| Protein GI | 86749971 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TCATCGGCAT TCTGGGGCGC GGACCGGTTG CGGAGCAATT GGTCGATTCG
CTGAAACGGC TCGAGTATCG CGGCTATGAT TCCGCCGGCG TCGCGACGCT GGAAGGAACC
CGTCTCGATC GTCGGCGCGC CGAGGGCAAG CTGAGAAACC TCGAAGCCTG CCTCAAGAAA
GATCCCCTGA GCGGTCATTC CGGCATCGGC CATACCCGCT GGGCAACGCA CGGCAAGCCG
ACCGTGGCGA ACGCGCATCC GCATGTGGCC GACGGCGTCG CCGTGGTTCA CAACGGCATC
ATCGAGAATT TTCGCGAGCT GCGCACCGAG CTCGAAGCCG GTGGCGCCAA ATTCACCAGC
GAGACCGACA CCGAGGTGGT CGCGCATCTG GTGAACAGCT ACATGCGCAA AGGTGCGTCG
CCGGTGGATG CGGTCAAGGC GGCGCTGCCG CGGCTGCGCG GCGCGTTCGC GCTGGCGTTC
CTGTTCGAGG GCCACGACGA TCTGATGATC GGCGCGCGCA AGGGGTCGCC GCTGGCGATC
GGCTACGGCG ATGGCGAGAT GTATCTCGGC TCGGATGCGA TCGCGCTGGC GCCGCTCACC
GACGACATCA GCTATCTCGA CGACGACGAC TGGGTGGTGT TGACCCGGAA GGGCGCGGAA
GTTCACGACG CCAAGGGCGA CATCGTGCAG CGCGGCGTCA TGAAGTCGGG CGCGTCGTCC
TTCGTCGTCG ACAAGGCGAA TTATCGCCAT TTCATGGCCA AGGAAATCCA CGAACAGCCG
GAAGTCGTCG GCCATACGCT GGCGCACTAT CTCGACATGT CGACCGAGCG GGTGGCGCTG
CCGACGCAGC TGCCGTTCGA CTTCAAGGAT ATCCAGCGGA TCTCGATCAC CGCCTGCGGC
ACCGCGAACT ACGCCGGCTA CATCGGCAAG TACTGGTTCG AGCGGTTTGC CCGGCTGCCG
GTCGAGATCG ATATCGCCTC GGAGTTCCGC TATCGCGAAG CGCCGCTGCG CAAGGGCGAT
CTGGCGATCT TCATTTCGCA GTCGGGCGAG ACGGCCGACA CGCTGGCGGC GCTGCGCTAC
GCGAAAGAGC AGGGGTTGCA CACGCTGTCG GTCGTCAACG TGCCGACCTC GACCATCGCC
CGCGACAGCG AGACGGTGAT GCCGACGCTG GCCGGCCCCG AGATCGGCGT CGCCTCGACC
AAGGCCTTCA CCTGCCAGCT AACGGTGCTT GCTGCGCTGG CCGTGGCGGC GGGCCGGGCC
CGCGGCGAAT TGTCCGAGCA GGACGAAACG AAACTGGTCC ACGGTCTGAT CGAGTTGCCG
CGGCTGATGG CGGCCGCACT CGCCACCGAG CATCAGGTCG AGCGGCTGGC GCGCGACATC
GCCAAGTCGC AGGACGTGCT CTATCTCGGT CGCGGCACCA GCTATCCGCT GGCGCTCGAA
GGCGCGCTGA AGCTCAAGGA AATCTCCTAC ATCCACGCCG AAGGCTACGC CGCCGGCGAA
CTCAAGCACG GCCCGATCGC GCTGATCGAC GAGAAGATGC CGGTGGTGGT GATTGCGCCC
TATGATCGCG TGTTCGAAAA GACCGTGTCG AACATGCAGG AGGTCGCGGC CCGCGGCGGC
CGGATTATCC TGCTTACCGA CGCCAAGGGG GCCGAGGAGG CGACGGTGGA GTCGCTGGTG
ACCATCGTGC TGCCGGACAT GGCTGCGGCG TTCACGCCGT TGGTGTATGC GATCCCGGTG
CAACTGCTCG CCTACCATAC GGCCGTCGTG ATGGGCACGG ACGTCGACCA GCCGCGCAAT
CTGGCGAAGT CGGTGACCGT CGAATAG
|
|---|
| Protein sequence | MCGIIGILGR GPVAEQLVDS LKRLEYRGYD SAGVATLEGT RLDRRRAEGK LRNLEACLKK
DPLSGHSGIG HTRWATHGKP TVANAHPHVA DGVAVVHNGI IENFRELRTE LEAGGAKFTS
ETDTEVVAHL VNSYMRKGAS PVDAVKAALP RLRGAFALAF LFEGHDDLMI GARKGSPLAI
GYGDGEMYLG SDAIALAPLT DDISYLDDDD WVVLTRKGAE VHDAKGDIVQ RGVMKSGASS
FVVDKANYRH FMAKEIHEQP EVVGHTLAHY LDMSTERVAL PTQLPFDFKD IQRISITACG
TANYAGYIGK YWFERFARLP VEIDIASEFR YREAPLRKGD LAIFISQSGE TADTLAALRY
AKEQGLHTLS VVNVPTSTIA RDSETVMPTL AGPEIGVAST KAFTCQLTVL AALAVAAGRA
RGELSEQDET KLVHGLIELP RLMAAALATE HQVERLARDI AKSQDVLYLG RGTSYPLALE
GALKLKEISY IHAEGYAAGE LKHGPIALID EKMPVVVIAP YDRVFEKTVS NMQEVAARGG
RIILLTDAKG AEEATVESLV TIVLPDMAAA FTPLVYAIPV QLLAYHTAVV MGTDVDQPRN
LAKSVTVE
|
|---|
| |