Gene RPB_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2846 
Symbol 
ID3910639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3239507 
End bp3240298 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID637884746 
Productinvasion associated locus B 
Protein accessionYP_486459 
Protein GI86749963 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.798447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTT GCAACTTGGT CGCGACGGCC GGGCCGCGCG GGCGGGCATT CGTTCTGCTC 
ACGGCGGCGG CTGTGGCCGC CCTGACCGTC GCGTCCGCAG CGCAAGCGCA GGCCCCGCAG
CAGCAGCCGG CCGCCCCGAA GGCGGCTCCG GCGCCGAAGG CTCCCCCGAA AGCGGCGCCG
AAGGCCGGGC CCGCCGCGCA GGCGCCCGCC GCTGCGCCGC AGCAGGAGCA GCAGCAGGTT
CAGCTGATCT ATGCGCCGTG GACCAAATTC TGCCTCAAGG GCCAGGACGC CAACGCCAAG
CAGGTCTGCT TCACCGGCAA GGACGGCCGC ATCGAGTCCG GCCAGCCGGT GATCGCGGCG
GTGATCATCG AGCCGGAAGG CGAGCCGAAG AAGATCTTGC GCGTCACGCT GCCGCTCGGC
ATGCAGCTCG TTCACGGCAC CCGCATCATC GTCGACAGCA ACGCGCCGCA GCAGAGCCCT
TATGTGATCT GCTTCGCCAA CGGCTGCATG TCCGATTACG AAGCGACCCC GGAACTGCTC
GCCAGCATGA AGAAGGGCCA GAATCTGGTC GTCCAGGCGA TCAATTCCAA CGGCGCACCG
CTGACGCTGC CGCTGCCGCT GCAGGAGACC GGCGGATCGT TCGCCAAGGC CTATGACGGC
CCGCCGACCG ACCCGAAGCA GTTCGAGGAA ACCCAGAAGA AGCTGCAGGA AGAACTGCAG
AAGCGTGCCG AAGAACAGCG CAAGAAGCTC GAGGCCCAGG CCCCGGCGGG CGCCAATCCG
GCAGCGAAGT AA
 
Protein sequence
MKSCNLVATA GPRGRAFVLL TAAAVAALTV ASAAQAQAPQ QQPAAPKAAP APKAPPKAAP 
KAGPAAQAPA AAPQQEQQQV QLIYAPWTKF CLKGQDANAK QVCFTGKDGR IESGQPVIAA
VIIEPEGEPK KILRVTLPLG MQLVHGTRII VDSNAPQQSP YVICFANGCM SDYEATPELL
ASMKKGQNLV VQAINSNGAP LTLPLPLQET GGSFAKAYDG PPTDPKQFEE TQKKLQEELQ
KRAEEQRKKL EAQAPAGANP AAK