Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2846 |
Symbol | |
ID | 3910639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3239507 |
End bp | 3240298 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884746 |
Product | invasion associated locus B |
Protein accession | YP_486459 |
Protein GI | 86749963 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.798447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTT GCAACTTGGT CGCGACGGCC GGGCCGCGCG GGCGGGCATT CGTTCTGCTC ACGGCGGCGG CTGTGGCCGC CCTGACCGTC GCGTCCGCAG CGCAAGCGCA GGCCCCGCAG CAGCAGCCGG CCGCCCCGAA GGCGGCTCCG GCGCCGAAGG CTCCCCCGAA AGCGGCGCCG AAGGCCGGGC CCGCCGCGCA GGCGCCCGCC GCTGCGCCGC AGCAGGAGCA GCAGCAGGTT CAGCTGATCT ATGCGCCGTG GACCAAATTC TGCCTCAAGG GCCAGGACGC CAACGCCAAG CAGGTCTGCT TCACCGGCAA GGACGGCCGC ATCGAGTCCG GCCAGCCGGT GATCGCGGCG GTGATCATCG AGCCGGAAGG CGAGCCGAAG AAGATCTTGC GCGTCACGCT GCCGCTCGGC ATGCAGCTCG TTCACGGCAC CCGCATCATC GTCGACAGCA ACGCGCCGCA GCAGAGCCCT TATGTGATCT GCTTCGCCAA CGGCTGCATG TCCGATTACG AAGCGACCCC GGAACTGCTC GCCAGCATGA AGAAGGGCCA GAATCTGGTC GTCCAGGCGA TCAATTCCAA CGGCGCACCG CTGACGCTGC CGCTGCCGCT GCAGGAGACC GGCGGATCGT TCGCCAAGGC CTATGACGGC CCGCCGACCG ACCCGAAGCA GTTCGAGGAA ACCCAGAAGA AGCTGCAGGA AGAACTGCAG AAGCGTGCCG AAGAACAGCG CAAGAAGCTC GAGGCCCAGG CCCCGGCGGG CGCCAATCCG GCAGCGAAGT AA
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Protein sequence | MKSCNLVATA GPRGRAFVLL TAAAVAALTV ASAAQAQAPQ QQPAAPKAAP APKAPPKAAP KAGPAAQAPA AAPQQEQQQV QLIYAPWTKF CLKGQDANAK QVCFTGKDGR IESGQPVIAA VIIEPEGEPK KILRVTLPLG MQLVHGTRII VDSNAPQQSP YVICFANGCM SDYEATPELL ASMKKGQNLV VQAINSNGAP LTLPLPLQET GGSFAKAYDG PPTDPKQFEE TQKKLQEELQ KRAEEQRKKL EAQAPAGANP AAK
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