| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2840 |
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| Symbol | rimO |
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| ID | 3910633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 3233347 |
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| End bp | 3234672 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637884740 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_486453 |
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| Protein GI | 86749957 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG CGGCCGCGCC AAAAATCAGT TTTGTCTCGC TGGGATGCCC CAAGGCGCTG
GTGGATTCCG AGCGGATCAT CACCCGGCTG CGCGCCGAGG GCTACGAGCT CGCGCGCCAG
CATGACGGCG CCGATCTGGT CATCGTCAAC ACCTGCGGCT TCCTCGACAG CGCCAAGCAG
GAATCGCTCG CCGCGATCGG CGAAGCGATG GCTGCGAACG GCAAGGTGAT CGTCACCGGC
TGCATGGGCG CCGAGCCGGA GCAGATCGAG GCCGCCTACC CCGGCGTGCT GTCGATCACC
GGCCCGCAGC AATATGAGAG CGTGCTCGAC GCGGTGCATC GCGCCAAGCC GGCACTGCAC
AACCCGCATC TCGATCTCGT ACCCGAGCAG GGCATCCGGC TGACGCCGCG GCATTACGCG
TATTTGAAGA TTTCAGAAGG CTGCAACAAC CGCTGCAGCT TCTGCATCAT CCCGAAGCTG
CGCGGCGATC TGGCGTCGCG CTCCGCCGCC GACGTGCTGC GCGAGGCCGA GAAGCTGGTC
GCCGCCGGCG TCAAGGAACT GCTGGTGATC TCGCAGGACA CTTCGGCCTA TGGTGTCGAT
CTGAAATACG CCGAGAGCCC TTGGAAGGAC CGCAGCGTCC GCGCCAAATT CATCGATCTG
GCGCGCGAAC TCGGCGAGCT CGGCGCCTGG GTCCGGCTGC ACTACGTCTA CCCCTATCCG
CATGTCGACG AAGTGATCGG CCTGATGACC GAGGGCAAGG TGCTGCCCTA TCTCGACATC
CCGTTCCAGC ACGCCAGCCC CGACGTGCTC AAGCTGATGA AGCGCCCGGC CGCGCAGGAC
AAGACGCTGG AGCGCATCAA GCGCTGGCGC GCGCAATGCC CGGACCTGGC GCTCAGATCG
ACCTTCATCG TCGGCTTCCC CGGCGAGACC GAGCGCGACT TCGAATTCCT GCTCGACTGG
CTCGACGAAG CCGAGATCGA TCGCCTCGGC GCGTTCAAAT ACGAGCCGGT CGCCGGCGCG
CCGTCAAATG CGCTCGAAGG TCAGGTGCCG GACGAGGTCA AGCAGGAGCG CTGGAATCGG
CTGATGGCGC GGCAGCAGGC GATCTCGGCG CGGCGGCTGA AGCGCAAGGT CGGCACGCGG
CAGCAGATCA TCATCGACGA GATCGGCCCG ACCGTCGCCA AAGGCCGCTC CAAGGCCGAT
GCGCCGGAGA TCGATGGCAG CGTGTATCTG ACCAGCCGCC GCCCGCTCCG CGTCGGCGAA
ATCGTCACCG CCAAGATCGA CCGCGCCGAC GCCTACGATC TGCACGGGAC GGTGGCGGGG
TTCTGA
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| Protein sequence | MQQAAAPKIS FVSLGCPKAL VDSERIITRL RAEGYELARQ HDGADLVIVN TCGFLDSAKQ
ESLAAIGEAM AANGKVIVTG CMGAEPEQIE AAYPGVLSIT GPQQYESVLD AVHRAKPALH
NPHLDLVPEQ GIRLTPRHYA YLKISEGCNN RCSFCIIPKL RGDLASRSAA DVLREAEKLV
AAGVKELLVI SQDTSAYGVD LKYAESPWKD RSVRAKFIDL ARELGELGAW VRLHYVYPYP
HVDEVIGLMT EGKVLPYLDI PFQHASPDVL KLMKRPAAQD KTLERIKRWR AQCPDLALRS
TFIVGFPGET ERDFEFLLDW LDEAEIDRLG AFKYEPVAGA PSNALEGQVP DEVKQERWNR
LMARQQAISA RRLKRKVGTR QQIIIDEIGP TVAKGRSKAD APEIDGSVYL TSRRPLRVGE
IVTAKIDRAD AYDLHGTVAG F
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