| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2839 |
|---|
| Symbol | |
|---|
| ID | 3910632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3232042 |
|---|
| End bp | 3232956 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884739 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_486452 |
|---|
| Protein GI | 86749956 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCTC CTCTCGATCT TCGTCTGCTG CAGACCTTCA TCGTCCTGGT TCAGACCGGT
AGTTTCTCGG AAACCTCGCG CCGGCTGGGA CGCACCCAGC CAGCCGTCAG CTTGCAGCTC
AACCGGCTGC AGGACGCGAC CGGCGCGCCG CTGTTCACCA AGGTCGGCCG CAAACTGGTG
CTGACCAATC ATGGCGAACT CGTTCTCGGC TATGCCCGGA CCATCATGGG CCTGCAGGAC
GAGCTGCGCT CCCGCCTCGC CGCGCCGAAG CTCGACGGCA TGGTGGTGCT CGGCATGCCG
GATCTGTATG CGGCCTACCT GCTGCCGGGG ATCCTGGCCG ACTTCCGCAG CGCCTATCCC
AACGTGAATG TCGAGCTGAA ATGCGCGCTG TCGAGCAAGC TGATGGCCTC GGTCGAGCGC
GCCGAGATCG ATCTGGCGAT CGTCACCGGA ATGCCTGCCT TCAAGGTCGG CGAGCTGGTG
GCGCAGGAAG AGCTGGTCTG GGTGACGTCG GAGCGCGGCT CCGTCCACCT CGAGAATCCG
GTGCCGCTCG CGATGCTGCC GCCCGGCAAC ATCTTTCGCG ATTTCGGCCT CGCGGCGCTG
GAGAGCATCG GCCGGACCTG GCGGCTGCGC TGCATCAGCG AAAGCATCGG CGGCATTCAG
GCGGCCGTGT TTGCGGGAAT CGCGGTCAGC GTGGTGGGGA AGAGTTCGGT GCTCCCGGGC
ATGCGCACAT TGGGCCGCGG CGACACCTTT CCGGCGCTGC CCAAGGTCGA TCTGGTGATG
TACCGCTCGG CCCGCCGCGC CAATCCGGCG GCGGAGGCGC TGGCCGGCGT GATCGTCCGA
CACTTCGCCA ATTCCGCGCT GGCACCTTCA GCGCGCTTCG TCCGCACCCA GGCCGGCAGC
GGGTCGCACG ATTAG
|
|---|
| Protein sequence | MLAPLDLRLL QTFIVLVQTG SFSETSRRLG RTQPAVSLQL NRLQDATGAP LFTKVGRKLV
LTNHGELVLG YARTIMGLQD ELRSRLAAPK LDGMVVLGMP DLYAAYLLPG ILADFRSAYP
NVNVELKCAL SSKLMASVER AEIDLAIVTG MPAFKVGELV AQEELVWVTS ERGSVHLENP
VPLAMLPPGN IFRDFGLAAL ESIGRTWRLR CISESIGGIQ AAVFAGIAVS VVGKSSVLPG
MRTLGRGDTF PALPKVDLVM YRSARRANPA AEALAGVIVR HFANSALAPS ARFVRTQAGS
GSHD
|
|---|
| |