Gene RPB_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2829 
Symbol 
ID3910622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3223579 
End bp3224421 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID637884729 
Producthypothetical protein 
Protein accessionYP_486442 
Protein GI86749946 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.023481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.780645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TGTTGGCGCT CGCAGCGCTG ATGCTGGCAA GCACTGTGGC CCAGGCCGGC 
GAAACCTATT CGTTCGACAT TGGCGGACGC ACGATCCGGA TCGAGAAGCC GCGGGATTGC
GATGAGGCGT CCTGCGTGTC GGTCTCGATT CCCGGAATTT ATGAATCCGG GCCGAAGCGC
GCCAAACGCT CCCGCGACGA TCAGGACGAC GCGGACGACG ACCTGCGCAA CAACCGAAAG
CCGGTTCAGG AAAAGCCGGT TCAGGAGACC CGGAAGCCGC TCACCCAGCC GGAACCGACC
AGCCCCACCA AGGACACCAT GGAACCGGCA CGCGCTGCGC CCACGCCCCC GGTTCCTGCC
ACCACCGCAA GTCGGCCGGC GGACCCGGCG CCTACGCCGG CGACGGATCG CGCCCCCGAG
ACGGCTGCCG CCGCCGGCCC AGCGTCGACG GTGAGCCCGC AGACGAAATC GCCCGCCCCG
GTGGTGGCAG CCGTGCCGCC GTCAGTTCCG GCGCAGAACC AGGCGGCGCC GGCCCCCGAC
AAGCCGTCGC CGCTCGGCAT CTGGCTGACC GAAGAGAAGG AAGGCAAGAT CCGGATCGAG
CCGTGCGGCG AGCATCTGTG CGGCTATTCG GTCAACGCCA AGTCGAACCA GAACGGCGAG
AAGATCCTCA TCAACATGAA ATCCGGCGGC GACAACAAAT GGAGCGGCCG GATCTACGAT
CCGAAAAGCG GCAGCCGGTA CGATTCCACG ATTGCCCTGC GGGGCCCGGA CCGGCTGAAG
GTGCAGGGTT GTGCCTTCGG CGGCATGTTC TGCGGAGGCC AGACATGGAC TCGCGTGGAA
TGA
 
Protein sequence
MKKLLALAAL MLASTVAQAG ETYSFDIGGR TIRIEKPRDC DEASCVSVSI PGIYESGPKR 
AKRSRDDQDD ADDDLRNNRK PVQEKPVQET RKPLTQPEPT SPTKDTMEPA RAAPTPPVPA
TTASRPADPA PTPATDRAPE TAAAAGPAST VSPQTKSPAP VVAAVPPSVP AQNQAAPAPD
KPSPLGIWLT EEKEGKIRIE PCGEHLCGYS VNAKSNQNGE KILINMKSGG DNKWSGRIYD
PKSGSRYDST IALRGPDRLK VQGCAFGGMF CGGQTWTRVE