| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2828 |
|---|
| Symbol | rpsB |
|---|
| ID | 3910621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3222259 |
|---|
| End bp | 3223254 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637884728 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_486441 |
|---|
| Protein GI | 86749945 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00696653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.845616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTC CCGAATTCAC GATGCGTCAG CTGCTCGAGG CTGGCGTGCA TTTCGGTCAC
CAGTCGCATC GCTGGAATCC GAAAATGGCC GAGTACATTT TCGGCGCCCG CAACAACATC
CACATCATCG ACCTCGCGCA GACCGTGCCG TTGATGCACC GTGCGCTGCA GGCCATCAGC
GACACCGTCG CCAAGGGCGG CCGCGTGCTG TTCGTCGGCA CCAAGCGCCA GGCGCAGGAC
GCCGTCGCCG ATGCCGCCAA GCGGTCGGCG CAGTACTTCG TCAATTCGCG CTGGCTCGGC
GGCACGCTGA CCAACTGGAA GACGATCTCC GGCTCGATCA AGCGGCTGCG CCATCTCGAC
GACGTGCTCA ATTCGGGCGA CGCCAGTGCC TACACCAAGA AGGAGCGGCT GACGCTGCAG
CGCGAGCGCG ACAAGCTCGA CCGTTCGCTT GGTGGCATCA AGGACATGGG CGGCCTGCCG
GACCTGATCT TCGTGATCGA CACCAACAAA GAAGACATCG CGATCCAGGA AGCCCAGCGG
CTCGGCATCC CGGTGGCGGC GATTGTCGAT ACCAATTGCG ATCCGAAGGG CATCACCTAT
CTGGTTCCGG GGAATGACGA CGCCGGTCGC GCTATCTCGC TCTACTGCGA TCTGATTGCG
CGCGCCGTGA TCGACGGCAT TTCCCGCGCG CAGGGCGAGT CCGGTATCGA CATCGGAGCT
TCGTCGCGTC CGCCGCGTGA AGACCTGCCG GCGGCGCAGG CAACGGGCTT CCAGGGCCTG
TCGGGTCCGC GCGGCACGCC GGACGACCTC AAGAAGCTGG CCGGCGTGTC CGGCGACATC
GAGAAGAAGT TCAACGACCT CGGCATTTTC CACTATTGGC AGCTCGCCGA GCTCAACGCC
GATACCGCGC ATCAGATCGG CGAAGAAGTC GGTCTGCCGG GTCGCGTCGA CGGCTGGGTC
GCCCAGGCCA AGGGGCTGAC CGCCGAGGCG GAATAA
|
|---|
| Protein sequence | MALPEFTMRQ LLEAGVHFGH QSHRWNPKMA EYIFGARNNI HIIDLAQTVP LMHRALQAIS
DTVAKGGRVL FVGTKRQAQD AVADAAKRSA QYFVNSRWLG GTLTNWKTIS GSIKRLRHLD
DVLNSGDASA YTKKERLTLQ RERDKLDRSL GGIKDMGGLP DLIFVIDTNK EDIAIQEAQR
LGIPVAAIVD TNCDPKGITY LVPGNDDAGR AISLYCDLIA RAVIDGISRA QGESGIDIGA
SSRPPREDLP AAQATGFQGL SGPRGTPDDL KKLAGVSGDI EKKFNDLGIF HYWQLAELNA
DTAHQIGEEV GLPGRVDGWV AQAKGLTAEA E
|
|---|
| |