| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2827 |
|---|
| Symbol | tsf |
|---|
| ID | 3910620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3221206 |
|---|
| End bp | 3222132 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884727 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_486440 |
|---|
| Protein GI | 86749944 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.161224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.539807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGA TTACTGCAGC GATGGTCAAG GAACTGCGCG AGACCACCGG CGTCGGCATG
ATGGACTGCA AGCAGGCGCT CGCCGAGAAC GACGGCAACA TGGAGGCCGC GGTCGACTGG
CTGCGCAAGA AGGGTTTGTC GAAGGCCGCC AAGAAGGCCG GCCGCGTCGC CGCGGAAGGC
CTGATCGGTG CGCTGACCGA CGGCACCAAG GGCGTCGTCA TCGAAGTCAA TTCGGAGACC
GATTTCGTCG CGCGCAACGA GCAGTTCCAG GGTCTGGTCA AGATGATCGC CCAGGTCGCG
CTCAAGGTCG GCGCCGATGT CGACAAGATC AACGCGGCCC CGGTCGGCTC CTCGACCGTC
GCCGGTGCGA TCTCGGATGC GATCGCCACG ATCGGCGAGA ACATGACCCT TCGCCGCGCC
GCTGCGCTGG AAGTGTCGCA GGGCGTGGTC GCGAGCTACG TCCACGGTGC GGTGATCGAG
GGCGCCGGCA AGATGGGCGT GATCGTCGCG CTGGAATCCA CCGGCAAGAC CGACGAGCTC
GCCGCGCTCG GCCGCCAGCT CGCGATGCAC GTCGCCGCCG CCAATCCGCA GGCGCTGGAT
CCGGCCGGGC TCGATCCGGA CGTGGTTCGC CGCGAGCGCG AGGTGATGGC CGACAAATAT
CGCCAGCAGG GCAAGCCGGA AAACATGATC GAGAAGATCG TCGAGAACGG CCTGAAGACC
TACTACAAGG AAGTCTGTCT GCTGGAGCAG GCCTACATCC ACGACGAGAA GGGCAAGGCC
GTCGGCCAGG CGGTGAAGGA AGCCGAGGGC AAGGTCGGCG CGCCGATCAA GATCATCGGC
TTCGTCCGCT ACGCGCTCGG CGAAGGCATC GAGAAGCAGA CCTCGGACTT CGCGGCGGAA
GTCGCCGCGG TCTCGGGCCA GAAGTAA
|
|---|
| Protein sequence | MATITAAMVK ELRETTGVGM MDCKQALAEN DGNMEAAVDW LRKKGLSKAA KKAGRVAAEG
LIGALTDGTK GVVIEVNSET DFVARNEQFQ GLVKMIAQVA LKVGADVDKI NAAPVGSSTV
AGAISDAIAT IGENMTLRRA AALEVSQGVV ASYVHGAVIE GAGKMGVIVA LESTGKTDEL
AALGRQLAMH VAAANPQALD PAGLDPDVVR REREVMADKY RQQGKPENMI EKIVENGLKT
YYKEVCLLEQ AYIHDEKGKA VGQAVKEAEG KVGAPIKIIG FVRYALGEGI EKQTSDFAAE
VAAVSGQK
|
|---|
| |