Gene RPB_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2825 
Symbolfrr 
ID3910618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3219782 
End bp3220345 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID637884725 
Productribosome recycling factor 
Protein accessionYP_486438 
Protein GI86749942 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.496262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCG AAAAGTTCGA CATCAATGAT TTGAAGCGCC GGATGCAGGG CGCGTCGCAG 
GCTTTGCAGC ACGAACTCGG CGGCCTGCGC ACCGGCCGCG CGGCGGCTTC GATGCTGGAG
CCCGTGCAGG TCGATGCCTA TGGCACCCAC ATGCCGCTCA ATCAGCTCGC CACCGTCACC
GTGCCCGAGC CCCGCTTGCT GTCGGTGCAG GTGTGGGACA AGTCGATGGT CCGGGCGGTC
GAAAAGGCGA TCGTCGACTC CAATCTCGGC CTCAGCCCGG CCACCGAGGG CCAGGTGTTG
CGGCTGCGGA TTCCCGAGCT CAATCAGGAT CGCCGCAAGG AACTGGTGAA GGTCGCGCAC
AAATACGCCG AGGCCGCCCG TGTCGCGGTC CGCCATGTTC GCCGCGACGG CCTTGATACG
ATCAAGAAAT TGGAGAAGTC TCACGAGATC TCCGAAGACG ATCAGAAGCG GCTGGATCAG
GAAGTTCAGA AGGCGACCGA TAGCGCGATT TCCGAGATCG ACCAGTTGCT CGCGAGCAAG
GAAAAAGAAA TCCTGACCGT CTAG
 
Protein sequence
MQSEKFDIND LKRRMQGASQ ALQHELGGLR TGRAAASMLE PVQVDAYGTH MPLNQLATVT 
VPEPRLLSVQ VWDKSMVRAV EKAIVDSNLG LSPATEGQVL RLRIPELNQD RRKELVKVAH
KYAEAARVAV RHVRRDGLDT IKKLEKSHEI SEDDQKRLDQ EVQKATDSAI SEIDQLLASK
EKEILTV