Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2824 |
Symbol | |
ID | 3910617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3218806 |
End bp | 3219564 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884724 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_486437 |
Protein GI | 86749941 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.318228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAG CTGCCGCCAC CGCGACTGAC CGGTCGGATC CTCCCGTCAT CCCGGCGCAT GTCGCGATCA TCATGGACGG CAACGGCCGC TGGGCCGCAG CCCGCGGCCT GCCGCGTGCC GAGGGGCATC GCCGCGGCGT CGAGGCGCTT CGCCGCGTCG TCCGGGCGGC GAACGACATC GGCATCCAGT ATCTGACGAT CTTCTCGTTC AGTTCGGAGA ACTGGACCCG GCCGAAGAGC GAGATCGGCG ATCTTTTCGG CCTGCTGCGC CGCTTCATCC GCAACGATCT CGCCTCTCTG CATCGCGACG GCGTTCGCGT CCGGGTGATC GGCGAGCGCG ACCGCCTCGA GCGCGATCTG TGCGCGATGC TCGACGAGGC CCAGGAACTG ACCCGCGACA ACACCAAGCT GAACCTCGTG GTCGCCTTCA ACTACGGCTC CCGGCAGGAA ATCGCCAACG CCGCGCAGCG GCTGGCGCGC GAGGTCGCCG AGGGTAAGCG CGATCCGGCG ACGATCGATA TCGAGACGCT GGGCCGCTAT CTCGACGCCC CCGACATTCC CGATCCCGAC CTGATCATCC GCACCAGCGG AGAGCAACGA TTGTCGAATT TTCTGATGTG GCAGGCGGCG TACAGTGAAC TGGTGTTCGT GCCCATTCAC TGGCCGGACT TCGACAAGGC CGCGCTGGAA GGCGCGATCG CCGAATATGC CCGACGCGAG CGCCGTTTCG GCGGCTTGGC CGCGAAAACA GGATCGTGA
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Protein sequence | MSKAAATATD RSDPPVIPAH VAIIMDGNGR WAAARGLPRA EGHRRGVEAL RRVVRAANDI GIQYLTIFSF SSENWTRPKS EIGDLFGLLR RFIRNDLASL HRDGVRVRVI GERDRLERDL CAMLDEAQEL TRDNTKLNLV VAFNYGSRQE IANAAQRLAR EVAEGKRDPA TIDIETLGRY LDAPDIPDPD LIIRTSGEQR LSNFLMWQAA YSELVFVPIH WPDFDKAALE GAIAEYARRE RRFGGLAAKT GS
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