Gene RPB_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2824 
Symbol 
ID3910617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3218806 
End bp3219564 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID637884724 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_486437 
Protein GI86749941 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.318228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAG CTGCCGCCAC CGCGACTGAC CGGTCGGATC CTCCCGTCAT CCCGGCGCAT 
GTCGCGATCA TCATGGACGG CAACGGCCGC TGGGCCGCAG CCCGCGGCCT GCCGCGTGCC
GAGGGGCATC GCCGCGGCGT CGAGGCGCTT CGCCGCGTCG TCCGGGCGGC GAACGACATC
GGCATCCAGT ATCTGACGAT CTTCTCGTTC AGTTCGGAGA ACTGGACCCG GCCGAAGAGC
GAGATCGGCG ATCTTTTCGG CCTGCTGCGC CGCTTCATCC GCAACGATCT CGCCTCTCTG
CATCGCGACG GCGTTCGCGT CCGGGTGATC GGCGAGCGCG ACCGCCTCGA GCGCGATCTG
TGCGCGATGC TCGACGAGGC CCAGGAACTG ACCCGCGACA ACACCAAGCT GAACCTCGTG
GTCGCCTTCA ACTACGGCTC CCGGCAGGAA ATCGCCAACG CCGCGCAGCG GCTGGCGCGC
GAGGTCGCCG AGGGTAAGCG CGATCCGGCG ACGATCGATA TCGAGACGCT GGGCCGCTAT
CTCGACGCCC CCGACATTCC CGATCCCGAC CTGATCATCC GCACCAGCGG AGAGCAACGA
TTGTCGAATT TTCTGATGTG GCAGGCGGCG TACAGTGAAC TGGTGTTCGT GCCCATTCAC
TGGCCGGACT TCGACAAGGC CGCGCTGGAA GGCGCGATCG CCGAATATGC CCGACGCGAG
CGCCGTTTCG GCGGCTTGGC CGCGAAAACA GGATCGTGA
 
Protein sequence
MSKAAATATD RSDPPVIPAH VAIIMDGNGR WAAARGLPRA EGHRRGVEAL RRVVRAANDI 
GIQYLTIFSF SSENWTRPKS EIGDLFGLLR RFIRNDLASL HRDGVRVRVI GERDRLERDL
CAMLDEAQEL TRDNTKLNLV VAFNYGSRQE IANAAQRLAR EVAEGKRDPA TIDIETLGRY
LDAPDIPDPD LIIRTSGEQR LSNFLMWQAA YSELVFVPIH WPDFDKAALE GAIAEYARRE
RRFGGLAAKT GS