Gene RPB_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2812 
SymbolgltX 
ID3910605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3204605 
End bp3206026 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content68% 
IMG OID637884712 
Productglutamyl-tRNA synthetase 
Protein accessionYP_486425 
Protein GI86749929 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC CCGTCGTCAC CCGCTTTGCG CCCTCGCCCA CCGGCTTCCT CCATATCGGC 
GGCGGCCGCA CCGCTTTGTT CAACTGGCTT TACGCCCGCA AGCTCGGCGG CAAGATGCTG
CTGCGAATCG AAGACACCGA TCGCCAGCGC TCCACCCAGC CGGCGATCGA CGCCATCCTC
GACGGGCTGA AATGGCTCGG CATCGAATGG GACGGCGACA CCGTCTACCA GTTCGCCCGG
GCCGCGCGGC ATCGCGAGGT CGCCGAGCAA TTGCTGGCGG CCGGCAAGGC CTATCGCTGC
TACGCGACCG CCGAGGAACT GACCGCGATG CGCGACAAGG CCCGCGCCGA GGGCCGCTCG
AAACTCTACG ACGGCAGCTG GCGCGACCGC GATCCGTCGG AGGCGCCGGC GGACATGAAG
CCGACGATCC GGCTCAAGGC GCCGCTCGAC GGCGAGACCG TGATCGAGGA TCAGGTCCAG
GGACGCGTCG TCTGGCAGAA CGAAAATCTC GACGACCTGG TGCTGCTCCG CGGCGACGGC
ACGCCGACCT ACATGCTCGC TGTGGTGGTC GACGATCACG ACATGGACGT CACCCACGTC
ATCCGCGGCG ACGACCATCT CATCAATGCG GCGCGGCAGA AGCAGATCTA CGACGCGATG
GGATGGGAGC TGCCGGTAAT GGCACACATC CCGCTCATCC ACGGCCCCGA CGGTTCGAAG
CTCTCCAAGC GCCACGGCGC GCTCGGTGTC GACGCCTATC GCGCGATGGG CTACCTGCCG
GCGGCGCTGC GCAACTATCT GGTCCGGCTC GGCTGGAGCC ACGGCGATCA GGAAATCTTT
ACCACGCAGG AAATGATCGA TGCGTTCGAC CTGGCCGCGA TCGGCCGCTC CGCGGCGCGG
TTCGATTTCG CCAAGCTGGA AAGCCTCAAT GGCCACTACA TCCGCCAGAG CGACGATCAA
TCTCTCGTGA CCCTGCTGGA GGATCTGCTG CATTACGTCC CGCAGGGACC GGCGATCGCC
GCCCGGCTCA CCGACACCAC CCGTGCCCAG CTGGTGCAGG CGATGCCGGG GCTGAAAGAG
CGGGCCAAGA CGCTGCTCGA ACTGCTCGAC AATGCCGGCT TCATCTTCGC CGACCGTCCG
CTCGCGATCG ACGCCAAGGG CCAGGCCGTG CTGACGCCCG ACATTCGCGC CCTGATCGGG
CGCCTGCGCA CCGCGCTGGA GGACGTCTCG CCGTGGACCG CGGCGACCAC CGAAGCGGCG
ATGCGGACGT TCGCGGAACA GGCCGGGCTC AAGCTCGGCG CGGTTGCGCA ACCGCTGCGC
GTCGCGCTGA CCGGACGGAC CACGTCACCG GGGATTTTCG ACGTTCTGGC CGTGCTGGGC
CGCGAGGAGT GCCTGTCCCG CCTCGCCGAT CAGGCCGCGT AG
 
Protein sequence
MTRPVVTRFA PSPTGFLHIG GGRTALFNWL YARKLGGKML LRIEDTDRQR STQPAIDAIL 
DGLKWLGIEW DGDTVYQFAR AARHREVAEQ LLAAGKAYRC YATAEELTAM RDKARAEGRS
KLYDGSWRDR DPSEAPADMK PTIRLKAPLD GETVIEDQVQ GRVVWQNENL DDLVLLRGDG
TPTYMLAVVV DDHDMDVTHV IRGDDHLINA ARQKQIYDAM GWELPVMAHI PLIHGPDGSK
LSKRHGALGV DAYRAMGYLP AALRNYLVRL GWSHGDQEIF TTQEMIDAFD LAAIGRSAAR
FDFAKLESLN GHYIRQSDDQ SLVTLLEDLL HYVPQGPAIA ARLTDTTRAQ LVQAMPGLKE
RAKTLLELLD NAGFIFADRP LAIDAKGQAV LTPDIRALIG RLRTALEDVS PWTAATTEAA
MRTFAEQAGL KLGAVAQPLR VALTGRTTSP GIFDVLAVLG REECLSRLAD QAA