Gene RPB_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2811 
Symbol 
ID3910604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3202762 
End bp3204447 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content64% 
IMG OID637884711 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_486424 
Protein GI86749928 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.129668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.859959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG CAGACGCAAC GACCTCCGAG GCAGGGCGCG ACTTCATTCG CGATATCGTC 
CAGGCCGATC TCGAGGCCGG CCGGCACGCC CAGGTCGTGA CCCGGTTCCC GCCTGAGCCG
AACGGGTATC TGCATATCGG CCACGCCAAG TCGATCGCGC TGAATTTCGG CATCGCCCAG
GAATTCGGCG GCCGCTGCAA TTTGCGGTTC GACGACACCA ATCCGACCAG GGAAGAGCAG
GAATATATCG ATTCGATTCA GGCCGACGTG CGCTGGCTCG GCTTCGACTG GGGCGAGCAC
ATGTTCTTCG CCTCGGATTA TTTCGACCGG CTCTACGATT GGGCCGAGCT GTTGATCAAG
AACGGCGACG CCTATGTCGA CGACCAGTCG CAGGATGAAA TCCGCGAGGC GCGCGGTACG
CTGATGGAGC CCGGCCGGAA CAGCCCGTTC CGCGATCGCT CAGTGGAAGA CAATCTCGAT
CTGTTCCGCC GCATGAAGGC CGGCGAGTTT CCGAACGGCG CGCGCGTGCT GCGCGCCAAG
ATCGACATGG CGTCGGGCAA CATCAATCTG CGCGACCCGG TGCTGTACCG CATCCTGCAT
GCGCATCACC CGCGCACCGG CGACGCCTGG TCGATCTACC CGAGCTACGA CTACGCGCAC
GGCCAGTCGG ATGCGATCGA GGGCGTCACG CATTCGATCT GTACACTCGA GTTCGAGGAT
CACCGGCCGC TGTACGAATG GTTGCTGTCG AAGCTGCCGG TGCCGTCGCA GCCGAAGCAG
TACGAGTTCG CGCGGCTCAA CATCACCTAC ACGCTGCTGT CGAAACGTGT GCTGACCGAA
CTCGTTCGCG GCGGCCATGT CGCCGGCTGG GACGATCCGC GGATGCCGAC GATGGCCGGC
TTGAAGCGTC GCGGCGTGCC ACCGGCGGCG ATCCGCGAGT TCGTCAAGCG GATCGGGGTG
GCCAAGGCCA ACAGCGTGGT CGATGTCGGT ATGCTGGAAT TCTGCATCCG CGAGGAGCTG
AACCGCACCT CGCAGCGCCG GATGGCGGTA CTGCGGCCGC TGAAAGTGGT GATCGAGAAC
TATCCGGAAG GGCAGACCGA AGAGCTCGAC GCGATCAACC ATCCCGACGA TCCCTCCGCC
GGCACCCGCA AGATCGCGTT CGGCCGCGAG CTTTATATCG AGCAGGACGA TTTCATGGAG
AACCCGCCGA AGAAGTTCTT CCGGCTCTCT CCCGGCAACG AAGTCCGGCT GCGCTACGCT
TACTTCATCA AGTGCCGCGA GGTGGTGAAG AACGATGCCG GCGAGATCGT CGAGCTGCGC
TGCACCTACG ATCCCGAAAC CCGCGGCGGC AACGCGCCGG ACGGCCGCAA GGTCAAGGCG
ACGATGCACT GGCTGTCGGC GGCACAATCG GTGCCGGCGG AAATCCGGGT CTACAATCAG
TTGTTCGCCA ATCCGGCGCC GAGTGCGGCG AATTTCACCG CCGACCTCAA TCCGCAGTCG
CTCGAAGTGC TGACCTGCGC CCGGATCGAG CCGGCGGTCG CGGCCGGCGT TTCGGCCGAG
CCGATCCAGT TCGAGCGCCA GGGTTACTTC GTCCGCGACA AGGACTCGAC CGCGGACAAG
CCGGTGTTCA ACCGCACCAT CGGGCTGCGT GATACCTTCG CCAAGGAAGT CGGCGGTAAA
AGCTGA
 
Protein sequence
MTTADATTSE AGRDFIRDIV QADLEAGRHA QVVTRFPPEP NGYLHIGHAK SIALNFGIAQ 
EFGGRCNLRF DDTNPTREEQ EYIDSIQADV RWLGFDWGEH MFFASDYFDR LYDWAELLIK
NGDAYVDDQS QDEIREARGT LMEPGRNSPF RDRSVEDNLD LFRRMKAGEF PNGARVLRAK
IDMASGNINL RDPVLYRILH AHHPRTGDAW SIYPSYDYAH GQSDAIEGVT HSICTLEFED
HRPLYEWLLS KLPVPSQPKQ YEFARLNITY TLLSKRVLTE LVRGGHVAGW DDPRMPTMAG
LKRRGVPPAA IREFVKRIGV AKANSVVDVG MLEFCIREEL NRTSQRRMAV LRPLKVVIEN
YPEGQTEELD AINHPDDPSA GTRKIAFGRE LYIEQDDFME NPPKKFFRLS PGNEVRLRYA
YFIKCREVVK NDAGEIVELR CTYDPETRGG NAPDGRKVKA TMHWLSAAQS VPAEIRVYNQ
LFANPAPSAA NFTADLNPQS LEVLTCARIE PAVAAGVSAE PIQFERQGYF VRDKDSTADK
PVFNRTIGLR DTFAKEVGGK S