Gene RPB_2810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2810 
Symbol 
ID3910603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3200390 
End bp3202684 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content71% 
IMG OID637884710 
ProductComEC/Rec2-related protein 
Protein accessionYP_486423 
Protein GI86749927 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.553334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.400148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGGG GCGATCGAGC CAGAGCACGG ACCAAGGCAC GGACCTGGCC GACGCGCGTC 
GCGTCGCCGG CCGGTGTGCT GGCGCCGTGG GGTGCATCCT TCTGGCCGGC GTTGGTCGAG
ACACTCCGTC AATGGGTCCG CGCCGAAGCC GGGCCGGGCC GGCTGCTGCC GTTCGTGCCG
ATCGCGTTCG GCGGCGGGAT CGCGCTGTAT TTCGCGGCCG ACCACGAGCC GGTAGCCTGG
GTGGCCTGTC TCGCTGCGGT GGCGTTCGGC GTGGCTGGGT TTCTGTTGCG GCGAAATCGG
GCATTTCCGC TCGCGGTGCT GATCACCGCC TTCGCCGCCG GATTCGCCAC CGTCGCATTG
AAAGCGCAGC GGATCGCGCA TCCGGTGCTG GCCAAGCCGG TGCAGGCGGC GACGCTCAAG
GGGTTCGTCG AGGCCCGCGA GGAGCGCGAG CGCACCGACC GCTTCGTGCT GCGCGTCACC
GAGATGGACA CGGCTGGCCG CGCGCCCGCC TTGCATCGCG TGCGGGTGTC GGTGCGCAAG
GGCGCTGCGC CTTCTGTCGG CAGCTTCGTG GCGTTGAAGG CGCGGCTGCT GCCGCCGCTG
TCGCCGCTGC GGCCGGGCGC TTACGATTTC GGCCGCGATC TGTATTTCCA GGGCATCGCC
GCCTCGGGCT TTGTGCTCGG CGCGATCACC ACGCAGGACC CGCCGGCCGA TGGCGGCTGG
CGGTTGCGCT ATGCGGCGAT CATGCAGGGG TTGCGCGATG CGATCGACGC GCGGATCCGT
CTCGCGCTCG ACGGCGACCA GCGCGCGATC GCCACCGCGC TGATCACCGG CCGACGCGAC
GCGATCTCGA CGCCGGTCAA CGACGCGATG TTCGTCTCCG GGCTCGGCCA CGTGCTGTCG
ATCTCCGGCT ATCACATGGC GGTGGTGGCC GGGGTGGTGT TCTTTGCGGT GCGCGCGGCT
CTGGCGCTGA TCCCGGCGCT GACGGTGACG TTTCCGATCA AGAAGGTCGC GGCTGCCGCG
GCGCTCGCCG CCGCTGCGTT CTATCTGCTG CTGTCCGGCG CCGAAGTCGC GACCCAGCGC
TCGTTCCTGA TGACGGCCGT GGTACTGGTG GCGGTGATGG TCGATCGCCG CGCCATCACG
TTTCGCACGT TGGCGATCGC CGCTTTGGTG GTGCTGCTGA TCGCGCCGGA AGCGCTGGTG
CATCCGAGCT TCCAGATGTC GTTCGCGGCG ACGCTGGGGT TGGTCGCATT GGTGCAGATC
GGCATGCCGG CGCTGTTCGC GACAGCAGAC AGTTCGACGA CGGCGCGCGC GGCGCTGTGG
GGCGGCCGCG AGATCGCGAT GCTGGCGCTG GCGTCGCTGG TCGCGGGGCT CGCGACCACG
CCCTATGCGG CCTATCACTT CCACCGCGTC ACGCCCTATG GGGTGATCGC CAATCTGCTG
GCGATGCCCG TCGTGTCGGT CGTGGTGATG CCGGCGGGCC TGCTCGGGCT GGCGGCAATG
CCGTTCGGCC TCGACGGGGT GTTCTGGCGT ATCATGGAGA TCGGCATCGA CTGGATGATC
GTGGTGGCGC TGTGGGTGGC GGCGTTGCCG GGCGCAATCG GGCGGATCGC GGCGTTCGGC
ACCGGGCCGC TGCTGCTGGC GTCGCTCGGC ATCGTCCTGC TCGGGCTGTT GCGCACGCCG
CTGCGCTATG GCGGGCTGGC ATTGCTGGCG TTTGCAACCG GCTGGGCGCT GCTGACGCCG
CAACCGGACA TCCTGATCGC CGGCGACGGC CGGCAGGTCG CGCTGCGCGG GCCCGATGGC
CGGCTGCGGC TGATGCAGAG CGGCGGCGAC AGTTTCAGGG TCAAGCAGTG GCTGGCTGCC
GACGCCGACC CTCGTGCGGT CGATGCGGCC TCGCTGCGCG AGGGGGTGTC GTGCGACGCC
GATGGCTGCG TCGCGGCGCT GGCTGATGGC GGGTTGGTGG CGCTGTCGTT CCGCGCCGAT
GGCATCGGTG ATGATTGCGC GCGCGCAAAA TTGGTCATAG CGCTGGCGCA GCCGCCGCCG
GACTGCGCGG CGCGTCTGAT CAGCACGGAG ATGCTCGCGG GCAGCGCCGC GCTGGCGCTG
CGGCGACATC CAGCCGGGGA CGGCGAATTC GTGACCGAGG CGGTTCGGCC GATAGCGCGC
GACCGGCCGT GGTTGCCCGC GCCGGCCGTT GCCGCCGGGG ATCCGCCGGG CGTCGCGCCG
CCGCAGCGGG CGGGTCCACG TCCCGCACCG GTCGATGCCA CGCCGGCGCC GTTGGATCAG
CACGACGAGG ACTGA
 
Protein sequence
MERGDRARAR TKARTWPTRV ASPAGVLAPW GASFWPALVE TLRQWVRAEA GPGRLLPFVP 
IAFGGGIALY FAADHEPVAW VACLAAVAFG VAGFLLRRNR AFPLAVLITA FAAGFATVAL
KAQRIAHPVL AKPVQAATLK GFVEAREERE RTDRFVLRVT EMDTAGRAPA LHRVRVSVRK
GAAPSVGSFV ALKARLLPPL SPLRPGAYDF GRDLYFQGIA ASGFVLGAIT TQDPPADGGW
RLRYAAIMQG LRDAIDARIR LALDGDQRAI ATALITGRRD AISTPVNDAM FVSGLGHVLS
ISGYHMAVVA GVVFFAVRAA LALIPALTVT FPIKKVAAAA ALAAAAFYLL LSGAEVATQR
SFLMTAVVLV AVMVDRRAIT FRTLAIAALV VLLIAPEALV HPSFQMSFAA TLGLVALVQI
GMPALFATAD SSTTARAALW GGREIAMLAL ASLVAGLATT PYAAYHFHRV TPYGVIANLL
AMPVVSVVVM PAGLLGLAAM PFGLDGVFWR IMEIGIDWMI VVALWVAALP GAIGRIAAFG
TGPLLLASLG IVLLGLLRTP LRYGGLALLA FATGWALLTP QPDILIAGDG RQVALRGPDG
RLRLMQSGGD SFRVKQWLAA DADPRAVDAA SLREGVSCDA DGCVAALADG GLVALSFRAD
GIGDDCARAK LVIALAQPPP DCAARLISTE MLAGSAALAL RRHPAGDGEF VTEAVRPIAR
DRPWLPAPAV AAGDPPGVAP PQRAGPRPAP VDATPAPLDQ HDED