Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2798 |
Symbol | trpC |
ID | 3910591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3189641 |
End bp | 3190438 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884698 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_486411 |
Protein GI | 86749915 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.812151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCGACA TCCTGACCAA GATTGAAGCC TACAAGCGCG AGGAGATCGC CGCCGCCAAG CGCGAGCGCC CGATCGCATC GCTGGAAGCG GATGCGCGCG CTGCGCCGCC GCCGCGCGGC TTCGTCCGCG CGCTCCGCGC CAAGCACGCG GCGGGCGACT ATGCGCTGAT CGCCGAGATC AAGAAGGCGT CGCCGTCGAA AGGCCTGATC CGCGCCGATT TCGATCCGCC GGCGCTCGCG CAGGCTTACG AACAAGGCGG CGCGGCCTGT CTCTCCGTGC TGACGGATAC GCCGTCGTTC CAGGGCAGCC TCGACTATCT CGTCGCGGCG CGCGCGGCTG TGTCGTTGCC GGCGCTGCGC AAGGACTTCA TGTACGACAC CTATCAGGTG GTCGAAGCCC GCGCCCATGG CGCCGACTGC ATCCTGATCA TCATGGCGGC GCTCGACGAT GCCGAGGCCC GCGACATCGA GGACGCCGCC TTCGATCTCG GCATGGACGT GCTGCTCGAA GTCCACGACC GTGCCGAACT CGACCGCGCG CTGCAGTTGC GTTCGCCGAT GATCGGCGTC AACAACCGCA ATTTGCGCAC TTTCGAGGTG ACGCTCGCGA CCAGCGAGGC GCTGGCGCCG CTGATCCCGA AGGATCGGCT GATGGTCGGC GAAAGCGGCA TCTTCACGCC CGACGACCTC GCCCGACTTG CTCGCGTTGG AATGTCGACC TTCCTGGTCG GCGAGAGCCT GATGCGTCAG GAGGACGTCG CCACCGCGAC CCGCGCGCTG CTCGCGCGCG CGGCCTGA
|
Protein sequence | MSDILTKIEA YKREEIAAAK RERPIASLEA DARAAPPPRG FVRALRAKHA AGDYALIAEI KKASPSKGLI RADFDPPALA QAYEQGGAAC LSVLTDTPSF QGSLDYLVAA RAAVSLPALR KDFMYDTYQV VEARAHGADC ILIIMAALDD AEARDIEDAA FDLGMDVLLE VHDRAELDRA LQLRSPMIGV NNRNLRTFEV TLATSEALAP LIPKDRLMVG ESGIFTPDDL ARLARVGMST FLVGESLMRQ EDVATATRAL LARAA
|
| |