Gene RPB_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2785 
Symbol 
ID3910578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3175128 
End bp3175997 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID637884685 
Producthypothetical protein 
Protein accessionYP_486398 
Protein GI86749902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0719299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.726284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGCG GTCTCGACCA TATCGTTCAT GCAGTGCGCG ACCTCGACGC CGCGGCGGAG 
GCTTATCAGC GGCTCGGTTT CAGCGTCGGC GCGCGCAACC GCCATCCCTT CGGCACGCAC
AATCGCATCG TGCAACTCGA CGGCTTCTTC GTCGAAATCC TCACTGTCGC CGAACCCGAG
AATATCGAAC CGCATCGCGC GGACGCGTTT TCGTTCGGCG CTTACCAGCG CGACTATCTG
GCGCGGCGCG AAGGCTTCTC GATGCTGCTG CTCGCAAGCC GCGACGCTGA GGCCGACGCG
CGCGGCTTCG CCGCGGTCGG GATCGGCGCG GGCGAGATCT TCAGTTTCGG CCGGGAAGGG
CAGCGGCCCG ACGGCAGCAT CGTCAAGCTC GGGTTCACGC TCGCATTCGC ACGCGATCCG
CTGTCGCCGG ACGCGGGCTT TGCGGCGTGC CGGCATCATC ATCCGGAGAA CTTCTGGAAT
CCGTCGTTCC AGATTCACGC CAACGGCGCG CGTGCGGCGG CGGCGGTCGT GATGATTGCC
GACAACCCGA CTGATCACCA TATCTTCCTC GGCGCCTTCA CCGGGGTGCG GGATCTGCAC
GCGTCGTCGA TCGGCGTCAT TGCACAGACC GAGCGCGGCG ACATCGACAT CGTCGAGCCG
GTGTCGTTCC GCGACCAGTA CGGCGTCGCC GCCGCGGTGG ATGCGGAGGG CGCGCGTTTC
GCCGGATTGC GGATTGCCGT GGAGGAGACG GCCGTGGTTG AACGCCTGTT GCAGCAGAAC
GGGATCGGCG CGACGCGCCA CATCGACCGC CTGGTCGTGC CGGATGTGTG CGGCGCGACG
CTGATCTTCG AACAAGGAAT GGTCCGTTGA
 
Protein sequence
MPCGLDHIVH AVRDLDAAAE AYQRLGFSVG ARNRHPFGTH NRIVQLDGFF VEILTVAEPE 
NIEPHRADAF SFGAYQRDYL ARREGFSMLL LASRDAEADA RGFAAVGIGA GEIFSFGREG
QRPDGSIVKL GFTLAFARDP LSPDAGFAAC RHHHPENFWN PSFQIHANGA RAAAAVVMIA
DNPTDHHIFL GAFTGVRDLH ASSIGVIAQT ERGDIDIVEP VSFRDQYGVA AAVDAEGARF
AGLRIAVEET AVVERLLQQN GIGATRHIDR LVVPDVCGAT LIFEQGMVR