| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2782 |
|---|
| Symbol | |
|---|
| ID | 3910575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3171344 |
|---|
| End bp | 3172855 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637884682 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486395 |
|---|
| Protein GI | 86749899 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.519133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTT TGCAGATTGC AGCCGCGGGC GCTGTGGTGG CGATGGCCGC TCTGACGACC
CTGGCGGAGG CTGCATCGAC TAAGCGAACG CGGCCGGCCC CGACCGAGAC GGTGGCGCCC
CGGCCGGCCG GCGAACCGAT TATGGCGATC ATCTCGATCA AGTCGCAGCA GGTCACGCTG
TACGACGCCG ACGGCTGGAT CCTGCGCGCG CCGGTCTCCA CCGGCACTAC GGGGCGGGAG
ACGCCGGCGG GCGTGTTTGC GATCCTCGAG AAAAATCGCG ACCATCGTTC GAGCATGTAC
GACGATGCCT GGATGCCGCA TATGCAGCGC ATCACCTGGA ACGGCATCGC GCTGCATGGC
GGCCCGCTGC CGGGCTACGC CGCCTCCCAT GGCTGCGTGC GGATGCCCTA TGGCTTCGCG
GAGACGCTGT TCGACAGGAC GCGGATCGGG ATGCGGGTCA TCGTCTCGCC GCAGGACACG
GCCCCGGTGG ATATTTCGCA TCCGGCGCTG CTGGTGCCGA CCCCGGACGC CAGTTCAGCG
GCGCCGGTGC GCGCGCAGAC GCTGGCGCGT GAGGCCGATG AAGCCGCCGC CGCCGCAGTC
GACGCCAAGA AGGCCGCCAA GGCTGCGGCC CGCGAGGTGG CCCCGCTGAA GGCTACGCTT
CGGGCACTCG AACGGGCCAA GGCACGGGCC GAGGCGGAGC TGAAGCGTGC CGACAAAGTG
CTCGGTTCCG CCAAAACCGA CGACGCCCGG GCCAAGGCCG AGACGCAGCA GCAGAAGGCC
GCGCAGCGGG CCGGGGAGGC TGCGGCCCAA CTCGCCAATG CGATCGCGGA CGCTGAAGCC
AAACGGGCGC TGGCCGACAG TACCAAGGAA GCCGCCAGGG CGGCCGAGAC GAGGAAGGCA
GAGACGGCGC ACGTCGCTCT GGACGCCAAG CTCGCGCAGG AGCCGGTCTC GATCTACATC
AGCCGCGAAA CGCAGAAGCT CTACGTCCGC CGCAACACCC ACAAGCCCGC GCCGGACGGC
GGCGGCGAGG TGTTCGACGC CAGCATCGAG GTCCCGGTCA CGATCCGCGA TCCGCATCGG
CCGATCGGCA CGCATATCTT CACCGCCATG GCGAAGACGG ACATCGGGCT GCGCTGGAGC
GCGGTGACGA TCGACGAGGG TGACGGCGCC AGGGCGGCGC TGGATCGCAT TACGATCCCG
AAGGAGGTGC TCGACCGCAT CGGCCCGACG GCGCTGCCGC GCAGCTCGAT CGTGATTTCG
GACGAGCCGC TGAGCGTCGA GACCAACTAC CGCACCGAAT TCGTCGCGGT CCTGAAAGAC
CATCCGCAGG GCGGCTTCAT CACCCGCAAG CCGACACCCG CTGTCATGGT GGCCGATCGC
GACGACGGTT GGGACGACGG CGGCTTCGGC TTTTTCTTTC AGCGCGGGCC GGAGCCGCAG
CCGAGAAACT ACCGGCAACA GCGCGGCGGC CGCGTCTACC CGCCGCAACC GACGCCGGGC
TGGGGCTGGT AG
|
|---|
| Protein sequence | MRRLQIAAAG AVVAMAALTT LAEAASTKRT RPAPTETVAP RPAGEPIMAI ISIKSQQVTL
YDADGWILRA PVSTGTTGRE TPAGVFAILE KNRDHRSSMY DDAWMPHMQR ITWNGIALHG
GPLPGYAASH GCVRMPYGFA ETLFDRTRIG MRVIVSPQDT APVDISHPAL LVPTPDASSA
APVRAQTLAR EADEAAAAAV DAKKAAKAAA REVAPLKATL RALERAKARA EAELKRADKV
LGSAKTDDAR AKAETQQQKA AQRAGEAAAQ LANAIADAEA KRALADSTKE AARAAETRKA
ETAHVALDAK LAQEPVSIYI SRETQKLYVR RNTHKPAPDG GGEVFDASIE VPVTIRDPHR
PIGTHIFTAM AKTDIGLRWS AVTIDEGDGA RAALDRITIP KEVLDRIGPT ALPRSSIVIS
DEPLSVETNY RTEFVAVLKD HPQGGFITRK PTPAVMVADR DDGWDDGGFG FFFQRGPEPQ
PRNYRQQRGG RVYPPQPTPG WGW
|
|---|
| |