| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2770 |
|---|
| Symbol | |
|---|
| ID | 3910563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3157787 |
|---|
| End bp | 3159190 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884670 |
|---|
| Product | pyruvate dehydrogenase subunit beta |
|---|
| Protein accession | YP_486383 |
|---|
| Protein GI | 86749887 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACTC AAGTTCTGAT GCCCGCGCTG TCGCCGACCA TGGAGAAGGG CAACCTTTCG
AAATGGCTCA AGAAGGAAGG CGACAAGGTC AAGAGCGGCG ACGTGATCGC GGAGATCGAG
ACCGACAAGG CGACGATGGA AGTCGAAGCC GCCGATGACG GCACGCTCGG CAAGATCCTG
ATCCCCGAAG GCACCAACGA CGTCGCGGTC AACACCCCGA TCGCCACTAT CCTCGGCGAC
GGCGAAAGCG CCGCCGATGC CGACAAGGCA CCCGATCCTG CCGCGCAGAA CAAGAGCTCG
CAGTCTGCAC CGCCGGCCGC AGCATCGGAA GCCGCTGAAC CGAAGTCAGC GCCTGCGCAG
AGTGCTCCGG AAGCGCCCGC TGTCTCGGCT GCCGCAGATC CAGACATTCC CGCCGGCACC
GAAATGGTGA CGCAGACCAT CCGCGAAGCG CTGCGTGACG CGATGGCCGA GGAGATGCGT
CGCGATCCCG ACGTGTTCGT GATGGGCGAG GAAGTCGCCG AGTATCAGGG CGCCTACAAG
GTGACGCAGG GGCTGCTGCA GGAGTTCGGC GCGCGCCGCG TGATCGACAC CCCGATCACC
GAGCACGGCT TCGCCGGCGT CGGCGTCGGC GCGGCGATGA CCGGGCTGAA GCCGATTGTC
GAATTCATGA CCTTCAACTT CGCCATGCAG GCGATCGACC AGATCATCAA TTCCGCCGCC
AAGACGCTGT ACATGTCCGG CGGGCAACTC GGCTGCTCGA TCGTCTTCCG CGGCCCCAAC
GGCGCGGCCT CGCGCGTCGC CGCGCAGCAC AGCCAAGACT ACTCGGCCTG GTACGCGCAG
ATTCCCGGCC TCAAGGTGGT CGCGCCGTCG ACCGCCGCCG ACTACAAGGG CCTGCTCAAG
GCAGCGATCC GCGATCCCAA CCCGGTGATC TTCCTCGAAC ACGAGATGAT GTACGGGCAG
TCCGGCGAAG TGCCGAAGCT CGACGATTTC GTCATTCCGA TCGGCAAGGC GCGCATCGCG
CGCGCGGGCG AGCACGTCAC GCTGATCTCG TGGTCGCACG GCATGACCTA CGCGCTGAAG
GCGGCCGAGG AACTGGCCAA AGACGGCATC GACGCCGAAG TGATCGACCT GCGCACGCTG
CGGCCGCTCG ACACCGAGAC GATCATCGCC TCGGTGAAGA AGACCGGCCG CGCGGTGGCG
GTCGAGGAGG GCTGGCAGCA GAACGGCGTC GGCGCCGAAC TCGCTGCGCG GATTATGGAG
CACGCGTTCG ATTATCTGGA TGCGCCGGTC AAGCGCGTGT CGGGCAAGGA CGTGCCGATG
CCTTACGCAG CCAATCTCGA GAAGCTGGCG CTGCCGAGCG TCGCCGAAGT CGTCGAGGCG
GCCAAAGCCG TCTGCTATCG GTGA
|
|---|
| Protein sequence | MPTQVLMPAL SPTMEKGNLS KWLKKEGDKV KSGDVIAEIE TDKATMEVEA ADDGTLGKIL
IPEGTNDVAV NTPIATILGD GESAADADKA PDPAAQNKSS QSAPPAAASE AAEPKSAPAQ
SAPEAPAVSA AADPDIPAGT EMVTQTIREA LRDAMAEEMR RDPDVFVMGE EVAEYQGAYK
VTQGLLQEFG ARRVIDTPIT EHGFAGVGVG AAMTGLKPIV EFMTFNFAMQ AIDQIINSAA
KTLYMSGGQL GCSIVFRGPN GAASRVAAQH SQDYSAWYAQ IPGLKVVAPS TAADYKGLLK
AAIRDPNPVI FLEHEMMYGQ SGEVPKLDDF VIPIGKARIA RAGEHVTLIS WSHGMTYALK
AAEELAKDGI DAEVIDLRTL RPLDTETIIA SVKKTGRAVA VEEGWQQNGV GAELAARIME
HAFDYLDAPV KRVSGKDVPM PYAANLEKLA LPSVAEVVEA AKAVCYR
|
|---|
| |