Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2761 |
Symbol | |
ID | 3910554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3149366 |
End bp | 3150601 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637884661 |
Product | inner-membrane translocator |
Protein accession | YP_486374 |
Protein GI | 86749878 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATA CCTCCAAACT CGCCGACGTC GCACTGTTGA TCGGCTTTGC CATCGTGGTC GCGCTCGGGC CGGTGATCTT CACCCCGATC GGCGCCGGCT ATCCCGACCT TCTGCAGAAG TTCGCGATCT ACGGCATCTT CGCGATCGGC TTCAACATCC TGTTCGGTCT CACCGGCTAT CTGTCGTTCG GCCACGCCGC GTTTCTCGGT GTCGGCTCCT ACGCCGCGGT GTGGTCGTTC AAGCTGGTCT CGATGGACCT GCTGCCGGCG GTGGCGTTCT CGGTCATCCT CGCGGGCCTG CTGGCGCTGG CGATTGGGTT CATCAGCCTG CGGCGCTCGG GCATCTACTT CTCGATCCTG ACGCTCGCCT TCGCGCAGAT GTGCTACAAT ATGGCGTATT CGGTGCTGAC GCCGATCACC AATGGCGAGA CCGGATTGCG CGTGTTGCGC CAGGATCCGC GGCATCTCGA CGCCGCGCTC GGCTACGTCT CGCCGACGCC GTCGCTGCTC GGCCTGCCGA TCACCGGATG GACCGGCTTC TACATTTGCG GCGCGGTGCT GGTGGCGGCA TTCGGCCTGT CGATCGCGAT CTTCCGCTCG CCGTTCGGCA TGACGCTCCG CGCGATCAAA TCGAACCAGA ACCGGATGGG ATATACCGGC TATCACACCA GGCCGTATCT GCTGTCCGCC TTCGTGATTT CCGGCATGTT CGCCGGTCTG GCCGGCTCGT TGCTGGCGGC GACCGATCCG CTGGTCGGCG CCGAGCGGAT GCAGTGGACC GCGTCGGGCG AGGTGGTGCT GATGACCATC CTCGGCGGCT CCGGCACGCT GCTCGGTCCG GTGCTCGGCA CCGGCCTCAT CAAGTATTTC GAGAACATCT TCTCGGCCTA CAACGAGCAG CAACTGACCG CCGTGTTCGC CTTCTTGCCG GATGGCGTCC GCGAACTGGT GGTCAAGACC GCAGGCCTGT TCGTGGGCGA AGGTTGGCAG CTCACTCTCG GCCTGTTGTT CATGGCGGTG GTGATCTTCC TGCCCGGCGG CATTATGGAA GGCATCAACC GGCTGCTCGG CTTCAAGCAC ACGCCAAGGG TCAAGTCGCT CGGCGACTCG CCGCAGCGCG ATGGCCTCGG TGAGAGCGTG ATCGAAGAGA TGCCGTCGAG TCACGGCGCG GCGGCGGCCG AGAAGAAGGT CGCCGAGAAC GAGACTGCCG AGAAGAAGAG GGCCGTTGCG CCATGA
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Protein sequence | MKHTSKLADV ALLIGFAIVV ALGPVIFTPI GAGYPDLLQK FAIYGIFAIG FNILFGLTGY LSFGHAAFLG VGSYAAVWSF KLVSMDLLPA VAFSVILAGL LALAIGFISL RRSGIYFSIL TLAFAQMCYN MAYSVLTPIT NGETGLRVLR QDPRHLDAAL GYVSPTPSLL GLPITGWTGF YICGAVLVAA FGLSIAIFRS PFGMTLRAIK SNQNRMGYTG YHTRPYLLSA FVISGMFAGL AGSLLAATDP LVGAERMQWT ASGEVVLMTI LGGSGTLLGP VLGTGLIKYF ENIFSAYNEQ QLTAVFAFLP DGVRELVVKT AGLFVGEGWQ LTLGLLFMAV VIFLPGGIME GINRLLGFKH TPRVKSLGDS PQRDGLGESV IEEMPSSHGA AAAEKKVAEN ETAEKKRAVA P
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