| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2760 |
|---|
| Symbol | |
|---|
| ID | 3910553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3148354 |
|---|
| End bp | 3149361 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637884660 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_486373 |
|---|
| Protein GI | 86749877 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA TTTTTCTGCA GATCCTGAAC GGCCTCGATA AAGGAGGAGC CTATGCGCTG
ATCGCGCTCG GGCTGACCCT CGCCTTCGGC ACGCTCGGCG TGGTGAACTT CGCGCACGGC
GCGCTGTTCA TGCTCGGCGC GTTCTGCGCC GTGGTGTTCA ACAAGCTCCT GACTTTGGAG
ATCGTCAAAG TCGACCCGAC GCGGACCACC CCGTGGGGGT CGCCGCTCGA GGTCAAGACG
CCCTACGTCC AGGCGATGCT CGGCGACTGG GGCAAGATTT TGATCGACTA CTCGGTGCCG
GCGTCGATCC TGCTGGCGAT TCCGGTGATG CTGCTGATCG GCATCATCAT CGAGCGCGGC
CTGATCCGGT TCTTCTACAA GCGCCCGCAT GCCGACCAGA TCCTCGTCAC CTTCGGCCTC
GCCATCGTGT TGCAGGAGAT CGTCAAGCAC TTCTTCGGCG CCAACCCGAT CGCGCAGTCC
GCGCCGCAGA TTTTCTCCGG CAGCCTGCAG TTGACCGAGG CGATCGTCTA TCCGTACTGG
CGCATCGTCT ATCTGGCGTT TTCGCTGGCG GTGATCGCGG CGGTGTTCGC CTTTCTACAA
CTCACCACCT TCGGCATGGT CGTTCGGGCC GGCATGCAGG ACCGCGAGAC GGTCGGCCTG
CTCGGCATCA ACATCGAGCG CCGCTTCACA ATCGTGTTCG GTCTCGCCGC GGTGGTCGCA
GGGCTTGCCG GAGTGATGTA CACGCCGATC GTGCCGCCCG ACTATCACAT GGGCATGGAT
TTTCTCGTGC TGTCGTTCGT CGTCGTGGTG GTCGGCGGCA TGGGGTCGCT GCCGGGCGCC
GTGCTGGCGG GGTTCCTGCT CGGCATTCTG CAGTCGTTTG CCTCGATGAA CGAGGTCAAG
AGCCTGGTGC CGGGCATCGA CCAGATCATC ATCTATCTGG TCGCCGTCGT GATCTTGTTG
GTGCGCCCAC GCGGACTGCT GGGGCGCAAG GGCGTGATGG AGAGCTGA
|
|---|
| Protein sequence | MDAIFLQILN GLDKGGAYAL IALGLTLAFG TLGVVNFAHG ALFMLGAFCA VVFNKLLTLE
IVKVDPTRTT PWGSPLEVKT PYVQAMLGDW GKILIDYSVP ASILLAIPVM LLIGIIIERG
LIRFFYKRPH ADQILVTFGL AIVLQEIVKH FFGANPIAQS APQIFSGSLQ LTEAIVYPYW
RIVYLAFSLA VIAAVFAFLQ LTTFGMVVRA GMQDRETVGL LGINIERRFT IVFGLAAVVA
GLAGVMYTPI VPPDYHMGMD FLVLSFVVVV VGGMGSLPGA VLAGFLLGIL QSFASMNEVK
SLVPGIDQII IYLVAVVILL VRPRGLLGRK GVMES
|
|---|
| |