Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2758 |
Symbol | |
ID | 3910551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3145271 |
End bp | 3146101 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637884658 |
Product | exodeoxyribonuclease III |
Protein accession | YP_486371 |
Protein GI | 86749875 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.139698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.30939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCAG CCCGGATTTT TGAACCGACG GATAACGACA TGCGGATCGC AACCTGGAAC GTAAACTCTG TCAGGCAGCG ACTGGATCAC CTGGTCAGTT GGCTGAACGA GTGCGCGCCG GACGTGGTGT GCCTGCAGGA GATCAAGTGC GTCGACGAGG CGTTTCCGCG CGAGGCGATC GAAGCGCTCG GCTACAATGT CGTCACCCAC GGCCAGAAGA CGTTCAATGG CGTCGCATTG CTGTCGAAAT ATCCGCTGGA GGAAGCCACC CCTCGCCTCG CCGGCGACGA CGATGATACT CACGCCCGAT TCCTCGAAGG CGTTGTGTCG CTGAAGCGCG GCGTGGTCCG TGTCGCCTGC CTCTATCTGC CTAACGGGAA TCCGGTCGAG AGTGAAAAAT ATCCCTACAA GCTACGCTGG ATGTCGCGGC TTCTCGAGTA CACGCAGCAG CGCCTGAAAA CCGAGGAGCC GCTGATCCTG GCCGGCGACT TCAACGTGAT CCCGCAACCC ATCGACGTCC ACAACCCGGC CGGCTGGGTC GATGATGCAT TGTTCCGGCC GCAGACGCGG GAGAGTTTCC AGGCTCTGCT CGGCCTCGGA CTCACCGATG CGCTGCGCGC CTCCACCGAC GCGCCGGGCC AATACACATT CTGGGACTAC CAGGCCGGAG CCTGGCAGAA GAATTGGGGA CTGCGGATCG ACCACCTGCT GCTGTCGCCG CAGGCTACCG ACCGGCTCCG CAATGTCGGC ATCGACGCTT ACGTGCGGAA CTGGGAGAAG CCGTCCGACC ACGTGCCGGT GTGGGCGGAT TTCGATCTGG ATGCCGCCTG A
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Protein sequence | MAPARIFEPT DNDMRIATWN VNSVRQRLDH LVSWLNECAP DVVCLQEIKC VDEAFPREAI EALGYNVVTH GQKTFNGVAL LSKYPLEEAT PRLAGDDDDT HARFLEGVVS LKRGVVRVAC LYLPNGNPVE SEKYPYKLRW MSRLLEYTQQ RLKTEEPLIL AGDFNVIPQP IDVHNPAGWV DDALFRPQTR ESFQALLGLG LTDALRASTD APGQYTFWDY QAGAWQKNWG LRIDHLLLSP QATDRLRNVG IDAYVRNWEK PSDHVPVWAD FDLDAA
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