Gene RPB_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2758 
Symbol 
ID3910551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3145271 
End bp3146101 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID637884658 
Productexodeoxyribonuclease III 
Protein accessionYP_486371 
Protein GI86749875 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.139698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.30939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCAG CCCGGATTTT TGAACCGACG GATAACGACA TGCGGATCGC AACCTGGAAC 
GTAAACTCTG TCAGGCAGCG ACTGGATCAC CTGGTCAGTT GGCTGAACGA GTGCGCGCCG
GACGTGGTGT GCCTGCAGGA GATCAAGTGC GTCGACGAGG CGTTTCCGCG CGAGGCGATC
GAAGCGCTCG GCTACAATGT CGTCACCCAC GGCCAGAAGA CGTTCAATGG CGTCGCATTG
CTGTCGAAAT ATCCGCTGGA GGAAGCCACC CCTCGCCTCG CCGGCGACGA CGATGATACT
CACGCCCGAT TCCTCGAAGG CGTTGTGTCG CTGAAGCGCG GCGTGGTCCG TGTCGCCTGC
CTCTATCTGC CTAACGGGAA TCCGGTCGAG AGTGAAAAAT ATCCCTACAA GCTACGCTGG
ATGTCGCGGC TTCTCGAGTA CACGCAGCAG CGCCTGAAAA CCGAGGAGCC GCTGATCCTG
GCCGGCGACT TCAACGTGAT CCCGCAACCC ATCGACGTCC ACAACCCGGC CGGCTGGGTC
GATGATGCAT TGTTCCGGCC GCAGACGCGG GAGAGTTTCC AGGCTCTGCT CGGCCTCGGA
CTCACCGATG CGCTGCGCGC CTCCACCGAC GCGCCGGGCC AATACACATT CTGGGACTAC
CAGGCCGGAG CCTGGCAGAA GAATTGGGGA CTGCGGATCG ACCACCTGCT GCTGTCGCCG
CAGGCTACCG ACCGGCTCCG CAATGTCGGC ATCGACGCTT ACGTGCGGAA CTGGGAGAAG
CCGTCCGACC ACGTGCCGGT GTGGGCGGAT TTCGATCTGG ATGCCGCCTG A
 
Protein sequence
MAPARIFEPT DNDMRIATWN VNSVRQRLDH LVSWLNECAP DVVCLQEIKC VDEAFPREAI 
EALGYNVVTH GQKTFNGVAL LSKYPLEEAT PRLAGDDDDT HARFLEGVVS LKRGVVRVAC
LYLPNGNPVE SEKYPYKLRW MSRLLEYTQQ RLKTEEPLIL AGDFNVIPQP IDVHNPAGWV
DDALFRPQTR ESFQALLGLG LTDALRASTD APGQYTFWDY QAGAWQKNWG LRIDHLLLSP
QATDRLRNVG IDAYVRNWEK PSDHVPVWAD FDLDAA