| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2757 |
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| Symbol | |
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| ID | 3910550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3144029 |
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| End bp | 3145159 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637884657 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_486370 |
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| Protein GI | 86749874 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.220243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.336362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC GTCGCTGGAT CATCATTGCC TGCTTTCTGG GCATTTCCGC AGGGGCCGCT
GTTGTCCTGC AGCCGTACTG GTCGAAAAGC CAGGTCGCGA CCAAAAGCGC GCCGCGGACG
CGTGTGGTCA CGGTCGATCT GGACAAGGCG GTGCGGAAAC CGATCCCGGT CGATGTCGAC
GCGATCGGCA TGGTGACGCC GATCTCCAGC GTTGCGCTGA AATCCAGGCT CGAAACCACC
ATCGTCGACG TCCATTTCGA GGACGGCGCG CGGGTCAAGC AAGGCGATCT GTTGTTCACG
CTCGACTCGC GCCAGATCGA CGCCCAGATC GAGCAGGCCG AAGGCAATCT CGCCCGCGAC
CGCGCCCAGC TCGCCGGCGC CGAACGGGAC TTGCGCCGCT ATAACGAATT GATCGGGAAG
GGCGCCACCA CCCAGGTCAA CCTCGACAAC GCCAAGACCC AGGCCGACAT CCTCGCGGGA
ACCATCAGGG GCGCCCAGTC GGCGCTGGAT AATCTGCGGG TCCAGAAAAG CTATACTGCG
ATCCGCGCGC CGTTCTCCGG CCGGATCAGC GCCGCCAACG TCAAAATCGG CAATTTCGTC
CGCCCCGCGG ACACCGCGCC GTTGGCGACG ATCAACCAGA TGGCGCCGGT CTATGTCACT
TTCGCCGTCC CGCAGCGGGT TCTGGTCGAT CTGCGCGATG CGATGAAAGC AGGCGCCACC
AAGGTGGTCG CTACCATTCC CGGGAGCGGC CGATCCGAGG AGGGCAAGGT GGCAATGGTC
GAGAACACCG TCGACGCCAC CACCGGCATG GTCACGGTCC GCGGCGTCAT GGAAAACAGC
AACGAGACGC TGTGGCCGGG AACGCTGGTC AATACCAAGC TCACCGTTCG GACCGAGGAG
GCCGTTGCGG TGCCCACCGT GGCGGTGCAA CGCAGTCAGG GCGGCAATTT TGTGTTCGTG
ATCAAGAACG GCGTTGCGCA CGTCCAGCCG GTCACCGTCA GCCGCACCTT CATGGGAGAG
TCCGTCATCA CCGATGGCCT TGCTGGCGGC GAAGACGTGG TGACGGACGG CCAGTTGCTG
CTGTCGGAAG GCACCAGGGT CGAGCCGCGC AGCCGCAGGG CCGGAGCCTG A
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| Protein sequence | MAKRRWIIIA CFLGISAGAA VVLQPYWSKS QVATKSAPRT RVVTVDLDKA VRKPIPVDVD
AIGMVTPISS VALKSRLETT IVDVHFEDGA RVKQGDLLFT LDSRQIDAQI EQAEGNLARD
RAQLAGAERD LRRYNELIGK GATTQVNLDN AKTQADILAG TIRGAQSALD NLRVQKSYTA
IRAPFSGRIS AANVKIGNFV RPADTAPLAT INQMAPVYVT FAVPQRVLVD LRDAMKAGAT
KVVATIPGSG RSEEGKVAMV ENTVDATTGM VTVRGVMENS NETLWPGTLV NTKLTVRTEE
AVAVPTVAVQ RSQGGNFVFV IKNGVAHVQP VTVSRTFMGE SVITDGLAGG EDVVTDGQLL
LSEGTRVEPR SRRAGA
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