| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2747 |
|---|
| Symbol | |
|---|
| ID | 3910540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3130695 |
|---|
| End bp | 3131525 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884647 |
|---|
| Product | chromosome segregation and condensation protein ScpA |
|---|
| Protein accession | YP_486360 |
|---|
| Protein GI | 86749864 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.426419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG AAATTCTGCA GTTCGACACT GGGCGGCCCG CTGAGCAGGT CGACCAGGAC
GAGGCGCTCG TCATCGACGT CGAGGGCTAT GAAGGCCCGC TCGATCTGTT GCTGACGCTG
GCGCGGCAGC AGAAGGTCGA TCTGCACAAG ATCTCGATCC TGGCGCTGGC CGACCAGTAT
TTGCTCTTCA TCGAGGAAGC CCGAAAGATC CGCCTCGAAC TGGCCGCCGA CTATCTGGTG
ATGGCGGCAT GGCTGGCGTT TCTGAAGTCG CGGCTGCTGC TGCCGGAGCC GCCGGCGGCC
GAAGGCCCGA GCGCCGAGGA CATGGCGACC GCGCTCGCCA ACCGGCTGCG CCGCCTCGAG
GCGATCCGCG AAGCCGCCAA CCGGTTGATG ACGCGGCCGC AATTGCAGCG CGAGATCTTT
CCGCGCGGCA TGGCGGAGGC GATCGACGAG ATCAAGCATC CGAAATTCAC CGCGACCCTG
TACGACCTGC TCAGCGCCTA CGCGACGCAG CGGCAGTCGC GCGTGCTCGC GAGCGTGCAT
CTGGCGCGGC GCACGGTGTG GTCGCTGAGC GAGGCGCGCG CGTCGCTGGA GCGGCTGGTC
GGCCTCGCCG AGGATTGGAG CCGGCTCGAC GAGTATCTGC TCCGATATCT GGCCGATCCT
TCGCAGAAGG CAACGGTGCT GGCGTCGAGT TTCGCCGCAG CGCTGGAGTT GGTGCGCGAG
GGCGAAGTCG AACTGCATCA GTCGGGGCCT CTCGCGCCTT TGTATTTTCG TAAGCGTCCG
CCGTCTCCAG CGATGGAAGC GGCGGCCGTG CCGGACGTTC CGGCAGGGTA G
|
|---|
| Protein sequence | MTAEILQFDT GRPAEQVDQD EALVIDVEGY EGPLDLLLTL ARQQKVDLHK ISILALADQY
LLFIEEARKI RLELAADYLV MAAWLAFLKS RLLLPEPPAA EGPSAEDMAT ALANRLRRLE
AIREAANRLM TRPQLQREIF PRGMAEAIDE IKHPKFTATL YDLLSAYATQ RQSRVLASVH
LARRTVWSLS EARASLERLV GLAEDWSRLD EYLLRYLADP SQKATVLASS FAAALELVRE
GEVELHQSGP LAPLYFRKRP PSPAMEAAAV PDVPAG
|
|---|
| |