Gene RPB_2733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2733 
Symbol 
ID3910526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3117216 
End bp3117644 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID637884633 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_486346 
Protein GI86749850 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.400148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTTA CTCCTGCATT TGCTCAGGCC GCGGCCGCCG GCGGCGACGC CAACAGCATG 
CTGATGTCGC TGCTGCCGTT CGCGCTGATC TTCGTCATCA TGTATTTCCT GATCCTGCGG
CCGCAGCAGC GCAAGGTGAA GGAGCACGCC GAACTGGTGA AGAACATCCG CCGCGGCGAC
ACCATCATCA CCTCGGGCGG CCTGGTCGGC AAGGTGACCA AGGTGGTCGA CGACGACCAG
ATCGAGTTCG AACTCGCCGA CGGTGTCCGC GCGCGCCAGA TGCGCCAGAT GATCACCGGC
GTCCGCACCA AGGGCGAGCC GGTCAAGGAC GTTCCCGAGA AGGGCAAGGG CAAGTCCAAG
GACAAGGACG CCGACGACAA GGCCGAATCG GCCAAGGACT CGACCAAGGA CGACACCGCG
TCGAGCTGA
 
Protein sequence
MFVTPAFAQA AAAGGDANSM LMSLLPFALI FVIMYFLILR PQQRKVKEHA ELVKNIRRGD 
TIITSGGLVG KVTKVVDDDQ IEFELADGVR ARQMRQMITG VRTKGEPVKD VPEKGKGKSK
DKDADDKAES AKDSTKDDTA SS