Gene RPB_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2717 
Symbol 
ID3910510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3103914 
End bp3104699 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content55% 
IMG OID637884617 
ProductPhage Gp37Gp68 
Protein accessionYP_486330 
Protein GI86749834 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.249922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CACAGATCGA ATGGACCGAT GCCACGTGGA ACCCCGTGGT CGGCTGCACG 
ATCGTAAGCG CGGGCTGCAC CAACTGTTAC GCGATGGAAA TGGCTCGCCG CCTGCAAGCC
ATGCAGGTTG CGAAATACGC TGGCTTAACG CGGAGAAGTT CAAAACGAGT TATCTGGAAT
GGCGTCGTGC GCGAAGATGC CGACGCGCTT GCAATCCCGT ACCGGTGGCG GAAGCCAAAG
AAGATCTTCG TCAACTCGAT GAGCGATCTA TTCCACGAAC GGGTGAGCGA CGCCTTCATA
AATAAGGTAT GGGATGTGAT GCGGGACACG CCGCGTCATC ACTATCAGAT CTTAACAAAA
CGCCCGGCGC GGATGAGCAC CTTCGTGCGA TCCCACCTTG CTACCGTTCT CCCGAACGTA
TGGCTGGGGA CGAGTGTTGA GAATGGCGCT GTTGTAGATC GCATCGATCA CTTACGCACA
GTGCCAGCAG CAATCCGTTT CTTGTCGTTC GAACCCTTGA TAGGATCGGT CGGCGCGGTT
GATTTATGCG GAATTGATTG GGCGATTGTG GGTGGCGAAA GCGGTCGTTC CGCAAGACCG
ATCCGCGAAG AATGGATCGA CGAAATTTAC GAACAGTGTG AGCGTTTCAA CACCACCTTC
TTTTTTAAGC AGTGGGGCAC TTGGGGTAAA GATAACAAGC GGCGATCCAA GAAGGCGAAC
GGCCGCGAGT ATCGCGGTCA ACACTGGGAT GGGATGCCAG CATTAGATCG AACGATCGGA
GCCTAG
 
Protein sequence
MAETQIEWTD ATWNPVVGCT IVSAGCTNCY AMEMARRLQA MQVAKYAGLT RRSSKRVIWN 
GVVREDADAL AIPYRWRKPK KIFVNSMSDL FHERVSDAFI NKVWDVMRDT PRHHYQILTK
RPARMSTFVR SHLATVLPNV WLGTSVENGA VVDRIDHLRT VPAAIRFLSF EPLIGSVGAV
DLCGIDWAIV GGESGRSARP IREEWIDEIY EQCERFNTTF FFKQWGTWGK DNKRRSKKAN
GREYRGQHWD GMPALDRTIG A