| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2715 |
|---|
| Symbol | uvrA |
|---|
| ID | 3910508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3099548 |
|---|
| End bp | 3102583 |
|---|
| Gene Length | 3036 bp |
|---|
| Protein Length | 1011 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637884615 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_486328 |
|---|
| Protein GI | 86749832 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.325053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.199737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAG TGATCAAGGC GAAGCGCCAG CCGCCGCAAC GGCCGTCGGT GGCTTCGAGC
CGGACCGCCA TCACCATTCG CGGCGCCCGC GAGCACAATC TCAAGAACGT CGACGTCGTC
ATCCCGCGCG ACAAGCTCGC GGTGTTCACC GGCCTGTCCG GCTCCGGCAA ATCCTCGCTG
GCGTTCGACA CCATCTATGC CGAGGGCCAG CGCCGCTACG TCGAATCGCT GTCGGCCTAT
GCGCGGCAGT TCCTCGAGAT GATGCAGAAG CCGGACGTCG ATCAGATCGA CGGGCTGTCG
CCGGCGATCT CGATCGAGCA GAAGACCACC TCGAAGAACC CGCGCTCCAC GGTCGGCACC
GTCACCGAGA TCTACGACTA CATGCGCCTG TTGTGGGCCC GCGTCGGCGT GCCCTATTCG
CCCGCGACCG GGCTGCCGAT CGAGAGCCAG ACCGTGTCGC AGATGGTCGA CCGGGTGCTG
GCGCTGCCGG AGGGCACGCG GCTGTATCTG CTGGCGCCGG TGGTGCGCGG CCGCAAGGGC
GAGTACCGCA AGGAACTCGC CGACTGGCTC AAGAAAGGCT TCCAGCGCGT CAAGATCGAC
GGCGCCTTCC ACGAGCTCGC CGAAGCGCCG GTGCTCGACA AGAAATTCCC GCACGACATC
GACGTCGTGG TCGACCGCAT CGTGGTCCGC CCCGACATCG GCCAGCGCCT CGCCGAGAGT
TTTGAAACCG CGCTGAAGCT CGCCGAAGGG CTGGCGGTGA TCGAATATGC CGACGCGCCC
GCCACGCCGC CGGCGGCAGC CGTCGAGCCC GGTCCGGACG AGCCCGGCGA CAAGAAGAAA
AAGGCCGACA AGAAGGTCGC CAAGATCCAC GACAAGACCG GCGCCGAGCG CATCCTGTTC
TCGGAGAAAT TCGCCTGCCC GGTGTCCGGC TTCACCATTC CGGAAATCGA GCCGCGCCTG
TTCTCGTTCA ACAATCCCTA CGGCGCCTGC CCGGAATGCG GCGGGCTCGG CATCGAGCAG
CATATCGACG CCGATTTGGT CGTGCCCGAC AAGGAGCTGA CGCTGCGCAA GGGCGCGATT
GCGCCGTGGG CGAAATCATC CTCGCCCTAC TATCTGCAGA CGCTGACCGC GCTGGCGAAG
TTCTACAAAT TCACGCTCGA CACCAAATGG AAGGACCTGC CGAAGAAGGT CCAGACCGCG
CTGCTGTTCG GCTCCGGCGA CGACGAGATC AAATTCTCTT ATGAAGACGG GGTGCGCTCC
TACGACACCA AGAAGCCGTT CGAGGGCGTG GTGACCAATA TCGAGCGCCG CTTCCGCGAG
ACCGAGAGCG AGTGGGCGCG CGAGGAGCTC GGGAAGTACT TCTCCGACGT GCCTTGCGAG
GCCTGCCACG GCCATCGCCT CAAGCCCGAG GCGCTGTGCG TCAAGATCGG CGGCAAGCAC
ATCGGAAACA TCTCCGAACT CTCCGTGAAA GCCGCCGGCG AATGGTTCGA GGCGGTGCCG
GCATCGCTCA ACACCCAGCA GAACGAGATC GCCGTCCGCA TCCTCAAGGA GATCCGCGAC
CGGCTGAGCT TCCTGCTCGA CGTCGGCCTC AACTATCTGA CGCTGGCGCG CGCCGCCGGC
ACGCTGTCGG GCGGCGAAAG CCAGCGCATC CGGCTCGCCT CGCAGATCGG AAGCGGCCTC
ACCGGCGTGC TCTACGTGCT CGACGAGCCG TCGATCGGCC TGCACCAGCG CGACAACGCC
CGCCTGCTCG ACACCCTGAA ACGACTCCGC GACCTCGGCA ACACCGTGAT CGTGGTCGAG
CATGACGAGG ACGCGATCAG GCTGGCCGAT TTCGTGCTCG ATATCGGCCC CGGCGCCGGC
GTCCATGGCG GCCACATCGT GGCGCAGGGC ACGCCCGACG AGGTGATGGC CAATCCGAAA
TCGCTGACCG GCAAATATCT CACCGGCGAA TTGTCGGTGC CGATTCCGGA GCGCCGGCCG
CCGAACCATC GCCGCACCCT CAAGCTGGTC AACGCCCGCG GCAACAATCT CAAAAACGTC
ACCGCCGAAA TTCCGCTCGG CCTGTTCACC TGCGTCACCG GCGTCTCCGG CGGCGGCAAG
TCGACGCTGC TGATCGATAC GTTCTACAAG GCGATCGCCC GCAAGCTGAA CAACGCCTCC
GAGCCGCCGG CGCCGCACGA CCGCATCGAG GGCCTCGAGC ACATCGACAA GATCATCGAC
ATCGACCAGT CGCCGATCGG CCGCACCCCG CGCTCCAATC CTGCGACCTA CACCGGCGCG
TTCACGCCGA TCCGCGAATG GTTCGCCGGC CTGCCCGAGT CCAAGGCGCG CGGCTACGAG
CCGGGCCGCT TCTCCTTCAA CGTCAAGGGC GGCCGCTGCG AGGCCTGCCA GGGCGACGGC
GTCATCAAGA TCGAGATGCA CTTTTTGCCC GACGTCTACG TCACCTGCGA TGTCTGCAAG
GGCAAGCGCT ACAACCGCGA AACGCTCGAA GTGCTGTTCA AGGGCAAGTC GATCGCCGAC
GTGCTCGACA TGACGGTCGA GGAAGCCGCC GACTTCTTCA AGGCGGTGCC GCGCGTCCGC
GAGACCTTCA AGACCCTGCA CCGCGTCGGC CTCGACTACA TCCATGTCGG CCAGCAGGCG
ACGACGCTCT CCGGCGGCGA AGCCCAGCGC GTCAAGCTCG CCAAGGAACT GAGCAAGCGC
GCCACCGGCC GCACGCTTTA TATTTTGGAC GAGCCCACCA CCGGCCTGCA CTTCCACGAC
GTCGCCAAAC TGCTCGAAGT GCTGCACGAG CTGGTGGCGC AGGGCAATAC CGTGGTGGTG
ATCGAGCACA ATCTCGAAGT CATCAAGACC GCCGACTGGG TCATCGACCT CGGCCCCGAA
GGCGGCGACG GCGGCGGCGA AATCGTCGCC TGGGGCCCGC CGGAAGACAT CGTCAAGGCA
CCGCGGAGCT ACACCGGGAA GTTCCTGAAG CCGGTGCTGG AGAAGAAGGG GCCGGCGAAG
GCGACGAAGC GGAAGACGGA CGAGGCGGCG GAGTAA
|
|---|
| Protein sequence | MDEVIKAKRQ PPQRPSVASS RTAITIRGAR EHNLKNVDVV IPRDKLAVFT GLSGSGKSSL
AFDTIYAEGQ RRYVESLSAY ARQFLEMMQK PDVDQIDGLS PAISIEQKTT SKNPRSTVGT
VTEIYDYMRL LWARVGVPYS PATGLPIESQ TVSQMVDRVL ALPEGTRLYL LAPVVRGRKG
EYRKELADWL KKGFQRVKID GAFHELAEAP VLDKKFPHDI DVVVDRIVVR PDIGQRLAES
FETALKLAEG LAVIEYADAP ATPPAAAVEP GPDEPGDKKK KADKKVAKIH DKTGAERILF
SEKFACPVSG FTIPEIEPRL FSFNNPYGAC PECGGLGIEQ HIDADLVVPD KELTLRKGAI
APWAKSSSPY YLQTLTALAK FYKFTLDTKW KDLPKKVQTA LLFGSGDDEI KFSYEDGVRS
YDTKKPFEGV VTNIERRFRE TESEWAREEL GKYFSDVPCE ACHGHRLKPE ALCVKIGGKH
IGNISELSVK AAGEWFEAVP ASLNTQQNEI AVRILKEIRD RLSFLLDVGL NYLTLARAAG
TLSGGESQRI RLASQIGSGL TGVLYVLDEP SIGLHQRDNA RLLDTLKRLR DLGNTVIVVE
HDEDAIRLAD FVLDIGPGAG VHGGHIVAQG TPDEVMANPK SLTGKYLTGE LSVPIPERRP
PNHRRTLKLV NARGNNLKNV TAEIPLGLFT CVTGVSGGGK STLLIDTFYK AIARKLNNAS
EPPAPHDRIE GLEHIDKIID IDQSPIGRTP RSNPATYTGA FTPIREWFAG LPESKARGYE
PGRFSFNVKG GRCEACQGDG VIKIEMHFLP DVYVTCDVCK GKRYNRETLE VLFKGKSIAD
VLDMTVEEAA DFFKAVPRVR ETFKTLHRVG LDYIHVGQQA TTLSGGEAQR VKLAKELSKR
ATGRTLYILD EPTTGLHFHD VAKLLEVLHE LVAQGNTVVV IEHNLEVIKT ADWVIDLGPE
GGDGGGEIVA WGPPEDIVKA PRSYTGKFLK PVLEKKGPAK ATKRKTDEAA E
|
|---|
| |