| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2711 |
|---|
| Symbol | |
|---|
| ID | 3910504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 3095799 |
|---|
| End bp | 3097094 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637884611 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_486324 |
|---|
| Protein GI | 86749828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.155736 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCGG TAGAATTGGC AATCGTTGTG GGACTGATCG TCGCCAACGG ATTGCTTTCG
ATGTCCGAGC TGGCGATTGT GTCGTCCCGC CCGGCCAGGC TGGCGCTGCT GGCTCAAAAA
AAGGTCCGCG GCGCCCGGCA GGCGATGGTG CTGGCCGACG ATCCCGGCAA GTTCCTGTCG
ACAGTCCAGA TCGGCATCAC GCTGGTCGGT GTGTTGTCCG GCGCGTTCTC GGGCGCGACG
CTGGGCCAAC GCCTGAGCGA ATGGCTGGCC GAGCTCGCCG TTCCGTTTCC CGACATCATC
GGCTTCGGCC TGGTGGTGAC GCTGATCACC TATGCGACGT TGATCGTCGG CGAACTGGTG
CCGAAGCAGG TCGCGCTGCG CGACCCCGAA GCCGTCGCCG TCAAGGTCGC CCCGGCGATG
ACGGTGATCG CCAAGGTGTC ACGGCCGGTG GTGTTCATCC TCGATCTGTC CGGCAAGGCC
ATTCTGAAAC TGCTGGGCCA GGGCGGCGCG GCGGAGGAGA AGATTTCCGA GGAAGAGATC
CACAATCTGG TGATGGAAGC GGAAACCGCC GGCGTGCTCG AACCCGGCGA GCGCGAGATG
ATCGCCGGGG TGATGCGGCT CGGCGACCGG CCGGTCGGCG CGGTGATGAC GCCGCGGCCG
GAGGTGGATT CGGTCGATCT CGCCGATCCG CCCGAGACGA TCCGCGAGGC TTTTCTCGGC
AGCCCGCACT CCCGCCTGCC GGTGACCGAC GGCAATCGCG ACGACCCGAT CGGGATCATC
CAGGCCAAGG ACATGCTCGA GGTCTATCTG CGCGGCGACA AGCCGGACCT GCGCGCGCTG
GTGCGCGACG CGCCGGTGAT TCCGTCGTCC GCCGACGCCC GCGACGTGCT CGCCACGCTG
CGGAAATCGT CGGTGCACAT GGCGCTGGTC TATGACGAGT TCGGCGCCTT CGAGGGCGTC
GTCACCACCG CCGATATTCT CGAATCGATC GTCGGCGCGT TCGGGTCCGA GGACGGCCCG
GCGGAGCCCG CCGCGGTGCG CCGCGAGGAC GGCTCGTATC TGATCGCGGG CTGGATGCCG
GTCGACGAAT TCGGCGATCT GTTGCCGGTG CCGATCCCGG AGCACCGCGA CTACCACACC
GTCGCGGGCC TTATTTTGCA GCATTTCGGC GCGTTGCCGG CGGTCGGCGA CCGATTCGAC
TATCAGGGCT GGCGAATCGA GATTCTCGAC TTGGACGGGC GGCGGATCGA CAAGATCATG
GCGACGCGGA GCGCCGACGC GGAGACGGCG GCGTGA
|
|---|
| Protein sequence | MLSVELAIVV GLIVANGLLS MSELAIVSSR PARLALLAQK KVRGARQAMV LADDPGKFLS
TVQIGITLVG VLSGAFSGAT LGQRLSEWLA ELAVPFPDII GFGLVVTLIT YATLIVGELV
PKQVALRDPE AVAVKVAPAM TVIAKVSRPV VFILDLSGKA ILKLLGQGGA AEEKISEEEI
HNLVMEAETA GVLEPGEREM IAGVMRLGDR PVGAVMTPRP EVDSVDLADP PETIREAFLG
SPHSRLPVTD GNRDDPIGII QAKDMLEVYL RGDKPDLRAL VRDAPVIPSS ADARDVLATL
RKSSVHMALV YDEFGAFEGV VTTADILESI VGAFGSEDGP AEPAAVRRED GSYLIAGWMP
VDEFGDLLPV PIPEHRDYHT VAGLILQHFG ALPAVGDRFD YQGWRIEILD LDGRRIDKIM
ATRSADAETA A
|
|---|
| |