Gene RPB_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2709 
Symbol 
ID3910502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3094042 
End bp3094758 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID637884609 
ProductExsB 
Protein accessionYP_486322 
Protein GI86749826 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.492214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.217777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CAGTTTCCGA CCAGACCGCG CTGGTGCTAT TCTCCGGCGG GCAGGATTCC 
GCCACCTGCC TCGCCTGGGC GCTGTCGCGC TTTGCGCGGG TCGAGATGAT CGGCTTCGAC
TACGGCCAGC GCCACGCCGT CGAACTCGAT TGCCGGGCAA AGCTGCTCGA CGGGTTTCGC
GCGATCAGCA GTGAATGGGC GTCGAAGCTC GGCGACAGCC ACACGCTCGC GATCCCGACG
CTCAGCGCGA TCTCCGACAC CGCGCTGACC CGCGACGTCG AAATCGCGAT GGGGGCGGAC
GGCCTTCCGA ACACCTTCGT GCCCGGCCGC AACCTGATCT TTCTGACGTT TGCGGCCGCG
CTGGCCTATC GCCGCGGCAT CGCCGACATC GTCGGCGGGA TGTGCGAGAC CGATTACTCC
GGCTATCCGG ATTGTCGCGA CGATACCATC AAGGCGCTGC AAGGCGCGAT CAGCCTCGGC
ATGGCGCGCG ACTTCGAACT GCATACGCCG CTGATGTGGC GCGACAAGGC CGCGACCTGG
CAGCTCGCGC ATGATCTCGG CGGCGCGGCG CTGGTCGATC TGATCCGCGA GCACTCGCAC
ACCTGCTATC TCGGCGAACG CGGCGAGCGG CACGATTGGG GCTATGGCTG CGGCGAATGT
CCGGCCTGCG CGTTGCGCGC CAGGGGATGG CGGGAGTATC GGACGCGGAC CGGATAG
 
Protein sequence
MTEPVSDQTA LVLFSGGQDS ATCLAWALSR FARVEMIGFD YGQRHAVELD CRAKLLDGFR 
AISSEWASKL GDSHTLAIPT LSAISDTALT RDVEIAMGAD GLPNTFVPGR NLIFLTFAAA
LAYRRGIADI VGGMCETDYS GYPDCRDDTI KALQGAISLG MARDFELHTP LMWRDKAATW
QLAHDLGGAA LVDLIREHSH TCYLGERGER HDWGYGCGEC PACALRARGW REYRTRTG