Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2707 |
Symbol | |
ID | 3910500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3091517 |
End bp | 3092659 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637884607 |
Product | hypothetical protein |
Protein accession | YP_486320 |
Protein GI | 86749824 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.710813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.616034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAGA TCGAATCGTG TGAACGATCC ATCGGATGGG CGGCGGCAGG CACGGAGCGG TACGTCGCCG AATGCACGCG CGACGTCGGC AGATTTCTCG CCCGCGCCGC CGCGCTCGGC CCGCAAGCGT CGGTGACGCC GTTTCAATCC GCGAACTGGC TGAGGCCCTG GCTGCAGGTG CTGGCGCCGT CGGCCGATGT CGAACCGCTG CTGATCACCG TCCGCGACAG CGTGCGCGGC GGGATCGCGA TGCTGCTGCC CTTGGTGCTG CGGCGGTTCT ACGGCGTGAC GCTGGTCGAA TTCGCCGATC TGTCCGTGTC CGACTACGGC TTTCCGCTGC TCGGCCCGGC GGCGCCGACG ACGCCCGCCG CGGCCGCCGA AGCGTTCGAG GCGGCGATCG CGGCGATGCC GCCGGTCGAT GTGATCCGGC TGTGTAATCT GCCACGCGTG GTCGGCGGCC AGGTCAATCC GCTGGCATTG CTGCCCGGGC TGTCGCCGGG TTCGGTGCGC AACGTGATGG CCCTGCCCGC CAGTTGGGAC GACTACCTCG CCTCGCGCCC GCGCAAATTC CGCAAGGCGC TGCGCCAGCA TCACCGCGCC TTCGACGCGC TCGGCGGCGT CTACACTCGA ATGATCACCG ACGACGCCGA GGCGAGCCGC CTGCTCGATC GGCTCGACCA TTTTCAGCGG GCGCGGATCG CGGCGCGCGG CAAGCGCTTC GTGCTCGACC AGCCGGCCTA TTCGAATTTC TATCGCGAGG TCTACGAAGG CGGCCTCGCG CACCGCTTCG CGATGCTGTC GGTGCTGGAA TCCGGCGGCA GCATCGTCGC GCTGGCCTAC AGCCTGCTGC ATCAGCAAAC CTGCACCACG GTGCGGCTCG CGCATCTCGG CGAGCAATGG AGCCGCTGCT CGCCCGGCAT CGTGCTGGCG AGCGAGATCA TCCGCTGGCT GATCGAAAAC GGCGTGCGCA AATTCGATCT CGGCGCCGGC GGCTACGACT ACAAGAAGCG GCTCGGCTGC GAGCCCGAGC AATTGTCGAC GCTGGAAAGA CCGATGAGCA TCAAGGGCCG GATGGCGCTG TCGGCATGGA CGACGTTCGC CGGCCGGCGC TCGCTGCTTC AGTCGCTCGC CAGCGCGTCG TAG
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Protein sequence | MLQIESCERS IGWAAAGTER YVAECTRDVG RFLARAAALG PQASVTPFQS ANWLRPWLQV LAPSADVEPL LITVRDSVRG GIAMLLPLVL RRFYGVTLVE FADLSVSDYG FPLLGPAAPT TPAAAAEAFE AAIAAMPPVD VIRLCNLPRV VGGQVNPLAL LPGLSPGSVR NVMALPASWD DYLASRPRKF RKALRQHHRA FDALGGVYTR MITDDAEASR LLDRLDHFQR ARIAARGKRF VLDQPAYSNF YREVYEGGLA HRFAMLSVLE SGGSIVALAY SLLHQQTCTT VRLAHLGEQW SRCSPGIVLA SEIIRWLIEN GVRKFDLGAG GYDYKKRLGC EPEQLSTLER PMSIKGRMAL SAWTTFAGRR SLLQSLASAS
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