Gene RPB_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2707 
Symbol 
ID3910500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3091517 
End bp3092659 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content68% 
IMG OID637884607 
Producthypothetical protein 
Protein accessionYP_486320 
Protein GI86749824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.710813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.616034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGA TCGAATCGTG TGAACGATCC ATCGGATGGG CGGCGGCAGG CACGGAGCGG 
TACGTCGCCG AATGCACGCG CGACGTCGGC AGATTTCTCG CCCGCGCCGC CGCGCTCGGC
CCGCAAGCGT CGGTGACGCC GTTTCAATCC GCGAACTGGC TGAGGCCCTG GCTGCAGGTG
CTGGCGCCGT CGGCCGATGT CGAACCGCTG CTGATCACCG TCCGCGACAG CGTGCGCGGC
GGGATCGCGA TGCTGCTGCC CTTGGTGCTG CGGCGGTTCT ACGGCGTGAC GCTGGTCGAA
TTCGCCGATC TGTCCGTGTC CGACTACGGC TTTCCGCTGC TCGGCCCGGC GGCGCCGACG
ACGCCCGCCG CGGCCGCCGA AGCGTTCGAG GCGGCGATCG CGGCGATGCC GCCGGTCGAT
GTGATCCGGC TGTGTAATCT GCCACGCGTG GTCGGCGGCC AGGTCAATCC GCTGGCATTG
CTGCCCGGGC TGTCGCCGGG TTCGGTGCGC AACGTGATGG CCCTGCCCGC CAGTTGGGAC
GACTACCTCG CCTCGCGCCC GCGCAAATTC CGCAAGGCGC TGCGCCAGCA TCACCGCGCC
TTCGACGCGC TCGGCGGCGT CTACACTCGA ATGATCACCG ACGACGCCGA GGCGAGCCGC
CTGCTCGATC GGCTCGACCA TTTTCAGCGG GCGCGGATCG CGGCGCGCGG CAAGCGCTTC
GTGCTCGACC AGCCGGCCTA TTCGAATTTC TATCGCGAGG TCTACGAAGG CGGCCTCGCG
CACCGCTTCG CGATGCTGTC GGTGCTGGAA TCCGGCGGCA GCATCGTCGC GCTGGCCTAC
AGCCTGCTGC ATCAGCAAAC CTGCACCACG GTGCGGCTCG CGCATCTCGG CGAGCAATGG
AGCCGCTGCT CGCCCGGCAT CGTGCTGGCG AGCGAGATCA TCCGCTGGCT GATCGAAAAC
GGCGTGCGCA AATTCGATCT CGGCGCCGGC GGCTACGACT ACAAGAAGCG GCTCGGCTGC
GAGCCCGAGC AATTGTCGAC GCTGGAAAGA CCGATGAGCA TCAAGGGCCG GATGGCGCTG
TCGGCATGGA CGACGTTCGC CGGCCGGCGC TCGCTGCTTC AGTCGCTCGC CAGCGCGTCG
TAG
 
Protein sequence
MLQIESCERS IGWAAAGTER YVAECTRDVG RFLARAAALG PQASVTPFQS ANWLRPWLQV 
LAPSADVEPL LITVRDSVRG GIAMLLPLVL RRFYGVTLVE FADLSVSDYG FPLLGPAAPT
TPAAAAEAFE AAIAAMPPVD VIRLCNLPRV VGGQVNPLAL LPGLSPGSVR NVMALPASWD
DYLASRPRKF RKALRQHHRA FDALGGVYTR MITDDAEASR LLDRLDHFQR ARIAARGKRF
VLDQPAYSNF YREVYEGGLA HRFAMLSVLE SGGSIVALAY SLLHQQTCTT VRLAHLGEQW
SRCSPGIVLA SEIIRWLIEN GVRKFDLGAG GYDYKKRLGC EPEQLSTLER PMSIKGRMAL
SAWTTFAGRR SLLQSLASAS