Gene RPB_2698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2698 
Symbol 
ID3910491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3083652 
End bp3084473 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID637884598 
ProductABC transporter related 
Protein accessionYP_486311 
Protein GI86749815 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.507313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.626609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC CCGAGCTTCT GATCCGCGGG CTGTCGACCG GCTATCCGCG CCGGCCGGTG 
ATCCGCGATC TCTCGCTGCC GCCGCTGCCG GCGGGCAAGT TGATCGCCTT CGTCGGTCCG
AATGCGGCCG GCAAATCGAC CCTGCTGATG GCATTGGCCG GGCTGCTGCC GTCGACCGGT
GTCGTCGCCC TCGCCGACCG GGATCTGTCG TCGCTGTCGG CGCGCGAGCG CGCCAAGGTG
ATGGCGTTCA CGCCGCAATC CTTGCCGCAA GGCGTGGCGC TGAGCGTGAT CGAGTCGGTG
ATCGTGGCGC TACGCGCCTC GGCGACGGCG GATCCACTGC CCGGCGCGCA CGCGGCGCAA
CGCGCCGCGG CGGCGCTGGA CCGCCTCGGC ATCGCGGCGC TCGGGCTCGA ATCGCTCGAC
CAGCTCTCCG GCGGCCAGCG CCAGCTCGTG AGCCTGGCGC AGGCATTGGT CCGCGATCCG
AAGGTGCTGC TGCTCGACGA ACCGACCAGC GCACTCGACC TCCGCCACCA GATCGTGGTG
ATGCGCACGT TGCGCCGGCT GGCGGCGGAA GGCCACCTCG TCATCGTGGT GCTGCACGAT
CTGAATCTGG CGGGGCGGTG GGCCGATTGC GTCGTCGTGC TCGACCACGG CGGCTGCGCG
GCGGCCGGAA CGCCGGCCGA AGCCTTGAGC GTCGACATCA TCGCCGACGT CTACGGCGTG
ATGGCGCGGA TCGAGCCGGG GCCGGAAGGA CGGCCCCACA TCATCATCGA CGACGTGTTG
CCGTCGCCGG GGCAGTCCCG GCCGCGGAAG AGGAGTGCGT GA
 
Protein sequence
MNQPELLIRG LSTGYPRRPV IRDLSLPPLP AGKLIAFVGP NAAGKSTLLM ALAGLLPSTG 
VVALADRDLS SLSARERAKV MAFTPQSLPQ GVALSVIESV IVALRASATA DPLPGAHAAQ
RAAAALDRLG IAALGLESLD QLSGGQRQLV SLAQALVRDP KVLLLDEPTS ALDLRHQIVV
MRTLRRLAAE GHLVIVVLHD LNLAGRWADC VVVLDHGGCA AAGTPAEALS VDIIADVYGV
MARIEPGPEG RPHIIIDDVL PSPGQSRPRK RSA