Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_2696 |
Symbol | |
ID | 3910489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3081467 |
End bp | 3082600 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637884596 |
Product | periplasmic binding protein |
Protein accession | YP_486309 |
Protein GI | 86749813 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.773462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.636131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCGA CGATGGCGAT CGTGGCCGCC CTCGTGTGGG GGCTGCTGGG CGCCGCCGGT CCGGTCGCGG CCGAGACGAC CGTCACCGTT CGCGACGTGG CCGGACGCGA AGTCACGCTG GTGACTCCAG TGAAACGGAT CCTGCTCGGC GAAGGTCGTC AGTTCCTCGC GCTCGCCTTG CTGCATCCGG ATCCGGAATC GCTGCTGGCG GCGTGGTCGG GCGATATGCG GCGGCAGGAC AAGGTGCTGT ATCAGCAATA TCTGGCGAAG TTTCCCGGCC TCGGCCGGGT TCCGCTGGTG AGCACCGGCA GTCCGGATAC GTTCTCCGTT GAACAGGCGC TCGCCGCGGC CCCCGAGGTC GCAATCCTGA GCGGAGGCTT CGGTCCGTCG CAGCGCTCCG ACGACGTCGT CCGCAAACTG GAGTCGGCCG GTGTGCCGGT GGTGTTCATC GATTTTGTCG AGCAACCGCT GCGAAACACC GTTCCCAGCA TCCGGTTGCT CGGACAATTG CTCGGCCGGG AGGCGCGCGC CGAGGAGTTC ATCGGGTTCT ATCAGTCGCA TATGGACCGC ATCACCAACC GTCTGGCAGC CGCCAAGCCG GCGCTGCCGA ATGTGCTGAT GCATGCCCAT GCCGGCCATC AGGATTGCTG CAATTCGCCG GGACGGGCCA CCATCGGCGC TTTCGTCGAT GTCGCCGGCG GCCACAATAT CGCGACCGAT GTGCTGAAGC GGCCGGTCGG GCATCTCAGC CGCGAATACG TCATCTCCCG CAATCCCGAC GTCTATGTCG GCACCGGGGG CATGCATCTG GAGGCGTTGG GCGGATTGGT GATGGGACCG GGCGTCGACG CCGCGCGGTC GCGGCGTTTG CTCGCCTCGG TGGTGAGCAA GCCCGGCCTT GCCGGCCTGA GCGCGGTCCG CAACGGCCGG GTTCACGGCA TCTGGCATCT GTTCAACAAC ATGCCGCTGA ACGTGCTGGC GGTCGAAGCG ATGGCGAAAT GGTTTCATCC GGAGCTGTTC GCCGACGTCG ATCCCGACGC CAGCCTGCGC GAACTCAACG AGCGCTTTTT GCCGGTGCCG ATGCAGGGCA CGTTCTGGGT CAGCGTCGAC GATGTCGGAG CGCGCAGCCG ATGA
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Protein sequence | MRSTMAIVAA LVWGLLGAAG PVAAETTVTV RDVAGREVTL VTPVKRILLG EGRQFLALAL LHPDPESLLA AWSGDMRRQD KVLYQQYLAK FPGLGRVPLV STGSPDTFSV EQALAAAPEV AILSGGFGPS QRSDDVVRKL ESAGVPVVFI DFVEQPLRNT VPSIRLLGQL LGREARAEEF IGFYQSHMDR ITNRLAAAKP ALPNVLMHAH AGHQDCCNSP GRATIGAFVD VAGGHNIATD VLKRPVGHLS REYVISRNPD VYVGTGGMHL EALGGLVMGP GVDAARSRRL LASVVSKPGL AGLSAVRNGR VHGIWHLFNN MPLNVLAVEA MAKWFHPELF ADVDPDASLR ELNERFLPVP MQGTFWVSVD DVGARSR
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